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Q04J83

- Q04J83_STRP2

UniProt

Q04J83 - Q04J83_STRP2

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Protein
Submitted name:

Sialidase B

Gene
nanB, SPD_1499
Organism
Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-(2->3)-sialidase activity Source: UniProtKB-EC
  2. exo-alpha-(2->6)-sialidase activity Source: UniProtKB-EC
  3. exo-alpha-(2->8)-sialidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciSPNE373153:GIX6-1499-MONOMER.

Protein family/group databases

CAZyiCBM40. Carbohydrate-Binding Module Family 40.
GH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Sialidase BImported (EC:3.2.1.18Imported)
Gene namesi
Name:nanBImported
Ordered Locus Names:SPD_1499Imported
OrganismiStreptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)Imported
Taxonomic identifieri373153 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001452: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi373153.SPD_1499.

Structurei

3D structure databases

ProteinModelPortaliQ04J83.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4409.
HOGENOMiHOG000285031.
KOiK01186.
OMAiWRYHYDI.
OrthoDBiEOG61CM2G.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.40.220.10. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR002860. BNR_rpt.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR004124. Glyco_hydro_33_N.
IPR011040. Sialidases.
IPR023364. Trans_sialidase_dom3.
[Graphical view]
PfamiPF02012. BNR. 1 hit.
PF02973. Sialidase. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

Q04J83-1 [UniParc]FASTAAdd to Basket

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MNKRGLYSKL GISVVGISLL MGVPALIHAN ELNYGQLSIS PIFQGGSYQL    50
NNKSIDISPL LLDKLSGDSQ TVVMKFKADK PNSLQALFGL SNSKAGFKNN 100
YFSIFMRDSG EIGVEIRDAQ KGINYLFSRP ASLWGKHKGQ AVENTLVFVS 150
DSKDKTYTMY VNGIEVFSET VDTFLPISNI NGIDKATLGA VNREGKEHYL 200
AKGSIDEISL FNKAISDQEV STIPLSNPFQ LIFQSGDSTQ ANYFRIPTLY 250
TLSSGRVLSS IDARYGGTHD SKSKINIATS YSDDNGKTWS EPIFAMKFND 300
YEEQLVYWPR DNKLKNSQIS GSASFIDSSI VEDKKSGKTI LLADVMPAGI 350
GNNNANKADS GFKEINGHYY LKLKKNGDND FRYTVRENGV VYDETTNKPT 400
NYTINDKYEV LEGGKSLTVE QYSVDFDSGS LRERHNGKQV PMNVFYKDSL 450
FKVTPTNYIA MTTSQNRGES WEQFKLLPPF LGEKHNGTYL CPGQGLALKS 500
SNRLIFATYT SGELTYLISD DSGQTWKKSS ASIPFENATA EAQMVELRDG 550
VIRTFFRTTT GKIAYMTSRD SGETWSEVSY IDGIQQTSYG TQVSAIKYSQ 600
LIDGKEAVIL STPNSRSGRK GGQLVVGLVN KEDDSIDWKY HYDIDLPSYG 650
YAYSAITELP NHHIGVLFEK YDSWSRNELH LSNVVQYIDL EINDLTK 697
Length:697
Mass (Da):77,664
Last modified:November 14, 2006 - v1
Checksum:i38766D2F6747AE53
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000410 Genomic DNA. Translation: ABJ55283.1.
RefSeqiYP_816955.1. NC_008533.1.

Genome annotation databases

EnsemblBacteriaiABJ55283; ABJ55283; SPD_1499.
GeneIDi4442008.
KEGGispd:SPD_1499.
PATRICi19684251. VBIStrPne27904_1657.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000410 Genomic DNA. Translation: ABJ55283.1 .
RefSeqi YP_816955.1. NC_008533.1.

3D structure databases

ProteinModelPortali Q04J83.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 373153.SPD_1499.

Protein family/group databases

CAZyi CBM40. Carbohydrate-Binding Module Family 40.
GH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ55283 ; ABJ55283 ; SPD_1499 .
GeneIDi 4442008.
KEGGi spd:SPD_1499.
PATRICi 19684251. VBIStrPne27904_1657.

Phylogenomic databases

eggNOGi COG4409.
HOGENOMi HOG000285031.
KOi K01186.
OMAi WRYHYDI.
OrthoDBi EOG61CM2G.

Enzyme and pathway databases

BioCyci SPNE373153:GIX6-1499-MONOMER.

Family and domain databases

Gene3Di 2.120.10.10. 2 hits.
2.40.220.10. 1 hit.
2.60.120.200. 1 hit.
InterProi IPR002860. BNR_rpt.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR004124. Glyco_hydro_33_N.
IPR011040. Sialidases.
IPR023364. Trans_sialidase_dom3.
[Graphical view ]
Pfami PF02012. BNR. 1 hit.
PF02973. Sialidase. 1 hit.
[Graphical view ]
SUPFAMi SSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6."
    Lanie J.A., Ng W.L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E.
    J. Bacteriol. 189:38-51(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D39 / NCTC 7466.

Entry informationi

Entry nameiQ04J83_STRP2
AccessioniPrimary (citable) accession number: Q04J83
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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