Q04J83 (Q04J83_STRP2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sialidase B EMBL ABJ55283.1
EC=3.2.1.18 EMBL ABJ55283.1

Gene names

Name:	nanB EMBL ABJ55283.1
Ordered Locus Names:	SPD_1499

Organism

Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) [Complete proteome] [HAMAP] EMBL ABJ55283.1

Taxonomic identifier

373153 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Streptococcaceae › Streptococcus

Protein attributes

Sequence length	697 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ABJ55283.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	exo-alpha-(2->3)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->6)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->8)-sialidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q04J83 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 38766D2F6747AE53	FASTA	697	77,664
	10 20 30 40 50 60 MNKRGLYSKL GISVVGISLL MGVPALIHAN ELNYGQLSIS PIFQGGSYQL NNKSIDISPL 70 80 90 100 110 120 LLDKLSGDSQ TVVMKFKADK PNSLQALFGL SNSKAGFKNN YFSIFMRDSG EIGVEIRDAQ 130 140 150 160 170 180 KGINYLFSRP ASLWGKHKGQ AVENTLVFVS DSKDKTYTMY VNGIEVFSET VDTFLPISNI 190 200 210 220 230 240 NGIDKATLGA VNREGKEHYL AKGSIDEISL FNKAISDQEV STIPLSNPFQ LIFQSGDSTQ 250 260 270 280 290 300 ANYFRIPTLY TLSSGRVLSS IDARYGGTHD SKSKINIATS YSDDNGKTWS EPIFAMKFND 310 320 330 340 350 360 YEEQLVYWPR DNKLKNSQIS GSASFIDSSI VEDKKSGKTI LLADVMPAGI GNNNANKADS 370 380 390 400 410 420 GFKEINGHYY LKLKKNGDND FRYTVRENGV VYDETTNKPT NYTINDKYEV LEGGKSLTVE 430 440 450 460 470 480 QYSVDFDSGS LRERHNGKQV PMNVFYKDSL FKVTPTNYIA MTTSQNRGES WEQFKLLPPF 490 500 510 520 530 540 LGEKHNGTYL CPGQGLALKS SNRLIFATYT SGELTYLISD DSGQTWKKSS ASIPFENATA 550 560 570 580 590 600 EAQMVELRDG VIRTFFRTTT GKIAYMTSRD SGETWSEVSY IDGIQQTSYG TQVSAIKYSQ 610 620 630 640 650 660 LIDGKEAVIL STPNSRSGRK GGQLVVGLVN KEDDSIDWKY HYDIDLPSYG YAYSAITELP 670 680 690 NHHIGVLFEK YDSWSRNELH LSNVVQYIDL EINDLTK

References

[1]

"Genome sequence of Avery's virulent serotype 2 strain D39 of Streptococcus pneumoniae and comparison with that of unencapsulated laboratory strain R6." Lanie J.A., Ng W.-L., Kazmierczak K.M., Andrzejewski T.M., Davidsen T.M., Wayne K.J., Tettelin H., Glass J.I., Winkler M.E. J. Bacteriol. 189:38-51(2007) [PubMed: 17041037] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000410 Genomic DNA. Translation: ABJ55283.1.
RefSeq	YP_816955.1. NC_008533.1.
3D structure databases
ProteinModelPortal	Q04J83.
ModBase	Search...
Protein-protein interaction databases
STRING	Q04J83.
Protein family/group databases
CAZy	CBM40. Carbohydrate-Binding Module Family 40. GH33. Glycoside Hydrolase Family 33.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBSTRT00000019523; EBSTRP00000018763; EBSTRG00000019523.
GeneID	4442008.
GenomeReviews	Gene locus SPD_1499 in contig CP000410_GR.
KEGG	spd:SPD_1499.
PATRIC	19684251. VBIStrPne27904_1657.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4409.
GeneTree	EBGT00050000026665.
HOGENOM	HBG702051.
OMA	QEVSNIP.
ProtClustDB	CLSK560057.
Family and domain databases
InterPro	IPR002860. BNR_rpt. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR004124. Glyco_hydro_33_N. IPR011040. Neuraminidase. IPR023364. Trans_sialidase_dom3. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.40.220.10. G3DSA:2.40.220.10. 1 hit. G3DSA:2.120.10.10. Neuraminidase. 2 hits.
KO	K01186.
Pfam	PF02012. BNR. 4 hits. PF02973. Sialidase. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q04J83_STRP2

Accession

Primary (citable) accession number: Q04J83

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)