Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

tRNA pseudouridine synthase B

Gene

truB

Organism
Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei39NucleophileUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
Biological processtRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
Alternative name(s):
tRNA pseudouridine(55) synthaseUniRule annotation
Short name:
Psi55 synthaseUniRule annotation
tRNA pseudouridylate synthaseUniRule annotation
tRNA-uridine isomeraseUniRule annotation
Gene namesi
Name:truBUniRule annotation
Ordered Locus Names:OEOE_1313
OrganismiOenococcus oeni (strain ATCC BAA-331 / PSU-1)
Taxonomic identifieri203123 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeOenococcus
Proteomesi
  • UP000000774 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000846321 – 298tRNA pseudouridine synthase BAdd BLAST298

Interactioni

Protein-protein interaction databases

STRINGi203123.OEOE_1313

Structurei

3D structure databases

ProteinModelPortaliQ04ED7
SMRiQ04ED7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105D0T Bacteria
COG0130 LUCA
HOGENOMiHOG000231225
KOiK03177
OMAiVDCSKGT

Family and domain databases

HAMAPiMF_01080 TruB_bact, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR002501 PsdUridine_synth_N
IPR014780 tRNA_psdUridine_synth_TruB
IPR032819 TruB_C
PANTHERiPTHR13767 PTHR13767, 1 hit
PfamiView protein in Pfam
PF16198 TruB_C_2, 1 hit
PF01509 TruB_N, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00431 TruB, 1 hit

Sequencei

Sequence statusi: Complete.

Q04ED7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYNGIVLVDK PAGLTSFDVV AKLRKIFQQK QVGHTGTLDP SVTGLLVIVL
60 70 80 90 100
GKATKLIDYL QENQKQYRGT LILGLKTDTQ DMDGQVTEMQ FLKEAIADFK
110 120 130 140 150
KKAAFDSFLG SSDQLPPMYS AVKVGGKHLY ELARKGETIE RKSRKIKVME
160 170 180 190 200
FQQVGGSKFD ASKGQEYINF VATVSKGTYI RTLIEDFGAK LGLPATMMRL
210 220 230 240 250
RRIEADGYDV KNSINLEEIL ASKTPRKFII PMEKLLPTLP KYSVGSDDWQ
260 270 280 290
LIKNGGWLKE LPISVSPVKI FYNNSFQAIY EKQDGFYKPK KMLIHEDH
Length:298
Mass (Da):33,583
Last modified:November 14, 2006 - v1
Checksum:i0D7C4D09C43EDA46
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000411 Genomic DNA Translation: ABJ57185.1
RefSeqiWP_002819196.1, NC_008528.1

Genome annotation databases

EnsemblBacteriaiABJ57185; ABJ57185; OEOE_1313
GeneIDi4415154
KEGGiooe:OEOE_1313

Similar proteinsi

Entry informationi

Entry nameiTRUB_OENOB
AccessioniPrimary (citable) accession number: Q04ED7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: November 14, 2006
Last modified: March 28, 2018
This is version 71 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health