Q04DK9 (Q04DK9_OENOB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A 2 HAMAP MF_00170
EC=5.3.1.6 HAMAP MF_00170

Alternative name(s):
Phosphoriboisomerase A 2 HAMAP MF_00170

Gene names

Name:	rpiA2 HAMAP MF_00170
Ordered Locus Names:	OEOE_1611

Organism

Oenococcus oeni (strain ATCC BAA-331 / PSU-1) [Complete proteome] [HAMAP]

Taxonomic identifier

203123 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Oenococcus

Protein attributes

Sequence length	232 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170 SAAS SAAS004788
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170 SAAS SAAS004788
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP MF_00170 SAAS SAAS004788 EMBL ABJ57463.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q04DK9 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 677E82C2DD6E5B90	FASTA	232	25,389
	10 20 30 40 50 60 MEKNLQNELK KEAAIRAAEF VENDTVVGLG TGSTVKFLVD ELGRKVREEN LSFTGVTTSK 70 80 90 100 110 120 RTASQAESLG IKIVSLDSIP RIDLTIDGAD QVDNNFNGIK GGGAALLWEK IVATNSKKNI 130 140 150 160 170 180 WIVDQSKLVD RIGSFPLPVE VIPFGALHVL NKFEELNLNP ALRLTENGKK VMTDSQNYII 190 200 210 220 230 DLHLNQIIDP AKLSNQLINT VGVVEHGLFL NVVDKVVVGK KGQPLILENP DK

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-331 / PSU-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000411 Genomic DNA. Translation: ABJ57463.1.
RefSeq	YP_811128.1. NC_008528.1.
3D structure databases
ProteinModelPortal	Q04DK9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q04DK9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4415388.
GenomeReviews	Gene locus OEOE_1611 in contig CP000411_GR.
KEGG	ooe:OEOE_1611.
NMPDR	fig|203123.1.peg.1554.
PATRIC	22801472. VBIOenOen113004_1642.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	CLAERVR.
PhylomeDB	Q04DK9.
ProtClustDB	PRK00702.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q04DK9_OENOB

Accession

Primary (citable) accession number: Q04DK9

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	January 25, 2012
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)