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Protein
Submitted name:

Transcriptional regulator

Gene

OEOE_1854

Organism
Oenococcus oeni (strain ATCC BAA-331 / PSU-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciOOEN203123:GHNL-1854-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
Ordered Locus Names:OEOE_1854Imported
OrganismiOenococcus oeni (strain ATCC BAA-331 / PSU-1)Imported
Taxonomic identifieri203123 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLeuconostocaceaeOenococcus
Proteomesi
  • UP000000774 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi203123.OEOE_1854.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BROX-ray2.04A/B/C/D1-138[»]
ProteinModelPortaliQ04CY6.
SMRiQ04CY6. Positions 1-138.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ04CY6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 136135HTH marR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 3 HTH marR-type DNA-binding domains.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108A79. Bacteria.
COG1846. LUCA.
HOGENOMiHOG000235907.
OMAiQMTIIDY.
OrthoDBiEOG6H1Q1H.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PRINTSiPR00598. HTHMARR.
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50995. HTH_MARR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q04CY6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRDLGRLLK IASNQMSTRF DIFAKKYDLT GTQMTIIDYL SRNKNKEVLQ
60 70 80 90 100
RDLESEFSIK SSTATVLLQR MEIKKLLYRK VSGKDSRQKC LKLTKKANKL
110 120 130
ETIILSYMDS DQSQMTSGLN KEEVVFLEKI LKRMIESD
Length:138
Mass (Da):16,052
Last modified:November 14, 2006 - v1
Checksum:iE0067A1BCA49BF1E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000411 Genomic DNA. Translation: ABJ57686.1.
RefSeqiWP_002819711.1. NC_008528.1.

Genome annotation databases

EnsemblBacteriaiABJ57686; ABJ57686; OEOE_1854.
GeneIDi4415476.
KEGGiooe:OEOE_1854.
PATRICi22801990. VBIOenOen113004_1895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000411 Genomic DNA. Translation: ABJ57686.1.
RefSeqiWP_002819711.1. NC_008528.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3BROX-ray2.04A/B/C/D1-138[»]
ProteinModelPortaliQ04CY6.
SMRiQ04CY6. Positions 1-138.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi203123.OEOE_1854.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABJ57686; ABJ57686; OEOE_1854.
GeneIDi4415476.
KEGGiooe:OEOE_1854.
PATRICi22801990. VBIOenOen113004_1895.

Phylogenomic databases

eggNOGiENOG4108A79. Bacteria.
COG1846. LUCA.
HOGENOMiHOG000235907.
OMAiQMTIIDY.
OrthoDBiEOG6H1Q1H.

Enzyme and pathway databases

BioCyciOOEN203123:GHNL-1854-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ04CY6.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR000835. HTH_MarR-typ.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PRINTSiPR00598. HTHMARR.
SMARTiSM00347. HTH_MARR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50995. HTH_MARR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-331 / PSU-1Imported.
  2. "Crystal Structure of the Transcription Regulator MarR from Oenococcus oeni PSU-1."
    Kim Y., Volkart L., Gu M., Joachimiak A.
    Submitted (DEC-2007) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.04 ANGSTROMS).

Entry informationi

Entry nameiQ04CY6_OENOB
AccessioniPrimary (citable) accession number: Q04CY6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: March 16, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.