Q04BS9 (Q04BS9_LACDB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258

Gene names

Name:	murI HAMAP MF_00258
Ordered Locus Names:	LBUL_0451

Organism

Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) [Complete proteome] [HAMAP]

Taxonomic identifier

321956 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	261 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258
Catalytic activity	L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942
Pathway	Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942
Sequence similarities	Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Ontologies

Keywords
Biological process	Cell shape Cell wall biogenesis/degradation HAMAP MF_00258 SAAS SAAS015942 Peptidoglycan synthesis HAMAP MF_00258 SAAS SAAS015942
Molecular function	Isomerase HAMAP MF_00258 SAAS SAAS015942 EMBL ABJ58093.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic process Inferred from electronic annotation. Source: HAMAP regulation of cell shape Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	glutamate racemase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q04BS9 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: BDA46D6FEADE7A4A	FASTA	261	28,249
	10 20 30 40 50 60 MSKEYADRPI GVFDSGQGGL TVLSRLVDLM PNEDYVFYGD SANAPYGVKS KEEVYQLAKR 70 80 90 100 110 120 VVDELIDKHQ VKAVMIACNT ATSAAADRLR REYSLPIIGI EPAVKPAAEE NPGRQVVAMA 130 140 150 160 170 180 TPLTLEQDKF NQLVAECAEP GQVVKVPAPK LVELIEKGQT DSPAIYQYLE ELLAPYVGKA 190 200 210 220 230 240 AGVVLGCTHF PFAKQAIQEI LGPQAKVYDG AIGAAAEVKR QLASRDELNA GSQPGQILFE 250 260 NSAPAGADLS KRLYALYRQK Q

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000412 Genomic DNA. Translation: ABJ58093.1.
RefSeq	YP_812531.1. NC_008529.1.
3D structure databases
ProteinModelPortal	Q04BS9.
ModBase	Search...
Protein-protein interaction databases
STRING	Q04BS9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4436469.
GenomeReviews	Gene locus LBUL_0451 in contig CP000412_GR.
KEGG	lbu:LBUL_0451.
PATRIC	22220739. VBILacDel70259_0451.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0796.
HOGENOM	HBG645102.
OMA	QCHVRLV.
ProtClustDB	CLSK775446.
Family and domain databases
HAMAP	MF_00258. Glu_racemase. [Tree]
InterPro	IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR004391. Glu_race. [Graphical view]
Gene3D	G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KO	K01776.
PANTHER	PTHR21198. PTHR21198. 1 hit.
Pfam	PF01177. Asp_Glu_race. 1 hit. [Graphical view]
SUPFAM	SSF53681. Asp/Glu_race. 2 hits.
TIGRFAMs	TIGR00067. Glut_race. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q04BS9_LACDB

Accession

Primary (citable) accession number: Q04BS9

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)