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Q04869 (YM94_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 96. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YMR315W
Gene names
Ordered Locus Names:YMR315W
ORF Names:YM9924.07
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length349 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

Present with 9600 molecules/cell in log phase SD medium.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 349349Uncharacterized protein YMR315W
PRO_0000203357

Amino acid modifications

Modified residue21Phosphoserine Ref.5

Sequences

Sequence LengthMass (Da)Tools
Q04869 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 77C7F72321BCAD1F

FASTA34938,216
        10         20         30         40         50         60 
MSPLNVGIVG TGIFARDRHL PSYQEFPDKF KVIAAFNRHK AKALDFAKVA DIPENKVYDN 

        70         80         90        100        110        120 
LDEILNDPHV DYIDALLPAQ FNADIVEKAV KAGKPVILEK PIAANLDQAK EIVKIAESTP 

       130        140        150        160        170        180 
LPVGVAENWL YLPCIKIAKE QIEKIGPVVA FTHNSTGPFV TQNKYLTTTW RQKPEHIGGF 

       190        200        210        220        230        240 
LSDGGVHQLA LVISLLGEFG SVSALTRQVR ERSGADDIVF ATVQLKNKEV IGSFTYGSAF 

       250        260        270        280        290        300 
GATEKSVFLK VYGKNGTVTV DLSDKKDPVV KVKLGGSAED NGDEQIFKVD NDESFGVNAE 

       310        320        330        340 
FLNFHEAVSK KDKSLYLGTP RTAFHHLACV DAFLKSSAKN GDYVKIEQP 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII."
Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P. expand/collapse author list , Skelton J., Walsh S.V., Whitehead S., Barrell B.G.
Nature 387:90-93(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[4]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[5]"A multidimensional chromatography technology for in-depth phosphoproteome analysis."
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-2, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[6]"N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB."
Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A., Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E., Timmerman E., Prieto J., Arnesen T., Sherman F., Gevaert K., Aldabe R.
Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z54141 Genomic DNA. Translation: CAA90833.1.
AY557991 Genomic DNA. Translation: AAS56317.1.
BK006946 Genomic DNA. Translation: DAA10216.1.
PIRS59308.
RefSeqNP_014046.1. NM_001182826.1.

3D structure databases

ProteinModelPortalQ04869.
SMRQ04869. Positions 1-338.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid35495. 25 interactions.
DIPDIP-3844N.
IntActQ04869. 12 interactions.
MINTMINT-520070.
STRING4932.YMR315W.

Proteomic databases

PaxDbQ04869.
PeptideAtlasQ04869.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYMR315W; YMR315W; YMR315W.
GeneID855363.
KEGGsce:YMR315W.

Organism-specific databases

CYGDYMR315w.
SGDS000004932. YMR315W.

Phylogenomic databases

eggNOGCOG0673.
HOGENOMHOG000248145.
OMAFTAGKEM.
OrthoDBEOG7SXWD4.

Enzyme and pathway databases

BioCycYEAST:G3O-32979-MONOMER.

Gene expression databases

GenevestigatorQ04869.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR016040. NAD(P)-bd_dom.
IPR000683. Oxidoreductase_N.
IPR004104. OxRdtase_C.
[Graphical view]
PfamPF01408. GFO_IDH_MocA. 1 hit.
PF02894. GFO_IDH_MocA_C. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio979139.

Entry information

Entry nameYM94_YEAST
AccessionPrimary (citable) accession number: Q04869
Secondary accession number(s): D6W0E2
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: March 19, 2014
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XIII

Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD