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Protein

Pituitary-specific positive transcription factor 1

Gene

POU1F1

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Transcription factor involved in the specification of the lactotrope, somatotrope, and thyrotrope phenotypes in the developing anterior pituitary. Activates growth hormone and prolactin genes. Specifically binds to the consensus sequence 5'-TAAAT-3'.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi214 – 273HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActivator, DNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Pituitary-specific positive transcription factor 1
Short name:
PIT-1
Alternative name(s):
Growth hormone factor 1
Short name:
GHF-1
Gene namesi
Name:POU1F1
Synonyms:PIT-1, PIT1
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001007001 – 291Pituitary-specific positive transcription factor 1Add BLAST291

Proteomic databases

PaxDbiQ04788
PRIDEiQ04788

Interactioni

Subunit structurei

Interacts with PITX1. Interacts with LHX3. Interacts with ELK1.By similarity

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000012779

Structurei

3D structure databases

ProteinModelPortaliQ04788
SMRiQ04788
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini124 – 198POU-specificPROSITE-ProRule annotationAdd BLAST75

Sequence similaritiesi

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG3802 Eukaryota
ENOG410XQ7X LUCA
HOGENOMiHOG000116302
HOVERGENiHBG053120
InParanoidiQ04788
KOiK09363

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
IPR015586 Pit_1
IPR013847 POU
IPR000327 POU_dom
PANTHERiPTHR11636:SF84 PTHR11636:SF84, 3 hits
PfamiView protein in Pfam
PF00046 Homeobox, 1 hit
PF00157 Pou, 1 hit
PRINTSiPR00028 POUDOMAIN
SMARTiView protein in SMART
SM00389 HOX, 1 hit
SM00352 POU, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 1 hit
PROSITEiView protein in PROSITE
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
PS00035 POU_1, 1 hit
PS00465 POU_2, 1 hit
PS51179 POU_3, 1 hit

Sequencei

Sequence statusi: Complete.

Q04788-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSCQPFTSAD TFIPLNSESS ATLPLIMHHS AAECLPASNH ATNVMSTATG
60 70 80 90 100
LHYSVPSCHY GNQPSTYGVM AGSLTPCLYK FPDHTLSHGF PPMYQPLLPE
110 120 130 140 150
DPTAADFKQE LRRKSKLVEE PIDMDSPEIR ELEKFPNEFK VRRIKLGYTQ
160 170 180 190 200
TNVGEALAAV HGSEFSQTTI CRFENLQLSF KNACKLKAIL SKWLEEAEQV
210 220 230 240 250
GALYNEKVGA NERKRKRRTT ISIAAKDALE RHFGEQNKPS SQEILRMAEE
260 270 280 290
LNLEKEVVRV WFCNRRQREK RVKTSLNQSL FTISKEHLEC R
Length:291
Mass (Da):33,033
Last modified:April 27, 2001 - v3
Checksum:iC13EB6634697F8EA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti64P → S in AAB65789 (Ref. 2) Curated1
Sequence conflicti94Y → H in AAB65789 (Ref. 2) Curated1
Sequence conflicti136P → A in AAB65789 (Ref. 2) Curated1
Sequence conflicti141V → A in CAA73939 (Ref. 1) Curated1
Sequence conflicti144I → M in AAA31108 (PubMed:8098921).Curated1
Sequence conflicti155 – 161EALAAVH → QVAAAWT in CAA73939 (Ref. 1) Curated7
Sequence conflicti183A → R in CAA73939 (Ref. 1) Curated1
Sequence conflicti196E → V in CAA73939 (Ref. 1) Curated1
Sequence conflicti259R → S in AAA31108 (PubMed:8098921).Curated1
Sequence conflicti260V → F in CAA73939 (Ref. 1) Curated1
Sequence conflicti265R → H (PubMed:8098921).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y13617 mRNA Translation: CAA73939.1
AF016251 mRNA Translation: AAB65789.2
L03841 mRNA Translation: AAA31108.1
RefSeqiNP_999328.1, NM_214163.1
UniGeneiSsc.16019

Genome annotation databases

GeneIDi397325
KEGGissc:397325

Similar proteinsi

Entry informationi

Entry nameiPIT1_PIG
AccessioniPrimary (citable) accession number: Q04788
Secondary accession number(s): O18807, O46410
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: April 27, 2001
Last modified: March 28, 2018
This is version 119 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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