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Protein

Uncharacterized protein YMR074C

Gene

YMR074C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • hydrogen peroxide-mediated programmed cell death Source: SGD
Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-32776-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YMR074C
Gene namesi
Ordered Locus Names:YMR074C
ORF Names:YM9916.13C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XIII

Organism-specific databases

EuPathDBiFungiDB:YMR074C.
SGDiS000004678. YMR074C.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001215481 – 145Uncharacterized protein YMR074CAdd BLAST145

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineCombined sources1
Modified residuei121PhosphoserineCombined sources1
Modified residuei126PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQBiQ04773.
PRIDEiQ04773.

PTM databases

iPTMnetiQ04773.

Interactioni

Protein-protein interaction databases

BioGridi35249. 37 interactors.
DIPiDIP-5242N.
MINTiMINT-536983.

Structurei

Secondary structure

1145
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 15Combined sources13
Helixi44 – 47Combined sources4
Helixi52 – 64Combined sources13
Helixi66 – 82Combined sources17
Helixi91 – 104Combined sources14

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FH0NMR-A36-116[»]
2JXNNMR-A1-116[»]
ProteinModelPortaliQ04773.
SMRiQ04773.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ04773.

Family & Domainsi

Sequence similaritiesi

Belongs to the PDCD5 family.Curated

Phylogenomic databases

HOGENOMiHOG000194121.
InParanoidiQ04773.
KOiK06875.
OMAiIANFLEP.
OrthoDBiEOG092C5N82.

Family and domain databases

Gene3Di1.10.8.140. 1 hit.
InterProiIPR002836. PDCD5-related.
[Graphical view]
PANTHERiPTHR10840. PTHR10840. 1 hit.
PfamiPF01984. dsDNA_bind. 1 hit.
[Graphical view]
PIRSFiPIRSF015730. TFAR19. 1 hit.
SUPFAMiSSF46950. SSF46950. 1 hit.

Sequencei

Sequence statusi: Complete.

Q04773-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDPELQAIRE ARLAQLKNNS GGTNGDRNSG ANNGGGENSA PVGAAIANFL
60 70 80 90 100
EPQALERLSR VALVRRDRAQ AVETYLKKLI ATNNVTHKIT EAEIVSILNG
110 120 130 140
IAKQQNSQNN SKIIFERKDF SEDLNSFDKQ NAKNDDDEDD DDFFD
Length:145
Mass (Da):15,977
Last modified:November 1, 1997 - v1
Checksum:i36EEA1AFA3F6135D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48952 Genomic DNA. Translation: CAA88799.1.
BK006946 Genomic DNA. Translation: DAA09972.1.
PIRiS52834.
RefSeqiNP_013790.1. NM_001182572.1.

Genome annotation databases

EnsemblFungiiYMR074C; YMR074C; YMR074C.
GeneIDi855096.
KEGGisce:YMR074C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48952 Genomic DNA. Translation: CAA88799.1.
BK006946 Genomic DNA. Translation: DAA09972.1.
PIRiS52834.
RefSeqiNP_013790.1. NM_001182572.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FH0NMR-A36-116[»]
2JXNNMR-A1-116[»]
ProteinModelPortaliQ04773.
SMRiQ04773.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi35249. 37 interactors.
DIPiDIP-5242N.
MINTiMINT-536983.

PTM databases

iPTMnetiQ04773.

Proteomic databases

MaxQBiQ04773.
PRIDEiQ04773.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYMR074C; YMR074C; YMR074C.
GeneIDi855096.
KEGGisce:YMR074C.

Organism-specific databases

EuPathDBiFungiDB:YMR074C.
SGDiS000004678. YMR074C.

Phylogenomic databases

HOGENOMiHOG000194121.
InParanoidiQ04773.
KOiK06875.
OMAiIANFLEP.
OrthoDBiEOG092C5N82.

Enzyme and pathway databases

BioCyciYEAST:G3O-32776-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ04773.
PROiQ04773.

Family and domain databases

Gene3Di1.10.8.140. 1 hit.
InterProiIPR002836. PDCD5-related.
[Graphical view]
PANTHERiPTHR10840. PTHR10840. 1 hit.
PfamiPF01984. dsDNA_bind. 1 hit.
[Graphical view]
PIRSFiPIRSF015730. TFAR19. 1 hit.
SUPFAMiSSF46950. SSF46950. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYMW4_YEAST
AccessioniPrimary (citable) accession number: Q04773
Secondary accession number(s): D6VZP8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 2550 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome XIII
    Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.