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Protein

pH-response regulator protein palI/RIM9

Gene

RIM9

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Required for the proteolytic cleavage of the transcriptional repressor RIM101 in response to alkaline ambient pH, which is necessary for sporulation and invasive growth.1 Publication

GO - Biological processi

  • ascospore formation Source: SGD
  • meiosis I Source: GO_Central
  • mitotic cytokinesis Source: GO_Central

Enzyme and pathway databases

BioCyciYEAST:G3O-32765-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
pH-response regulator protein palI/RIM9
Alternative name(s):
Regulator of IME2 protein 9
Gene namesi
Name:RIM9
Ordered Locus Names:YMR063W
ORF Names:YM9916.02
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi

Organism-specific databases

EuPathDBiFungiDB:YMR063W
SGDiS000004667 RIM9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 3CytoplasmicSequence analysis3
Transmembranei4 – 24HelicalSequence analysisAdd BLAST21
Topological domaini25 – 90ExtracellularSequence analysisAdd BLAST66
Transmembranei91 – 111HelicalSequence analysisAdd BLAST21
Topological domaini112 – 128CytoplasmicSequence analysisAdd BLAST17
Transmembranei129 – 149HelicalSequence analysisAdd BLAST21
Topological domaini150 – 155ExtracellularSequence analysis6
Transmembranei156 – 176HelicalSequence analysisAdd BLAST21
Topological domaini177 – 239CytoplasmicSequence analysisAdd BLAST63

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000582161 – 239pH-response regulator protein palI/RIM9Add BLAST239

Proteomic databases

PaxDbiQ04734
PRIDEiQ04734

Interactioni

Protein-protein interaction databases

BioGridi35238, 283 interactors
DIPiDIP-4447N
IntActiQ04734, 1 interactor
STRINGi4932.YMR063W

Structurei

3D structure databases

ProteinModelPortaliQ04734
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the palI/RIM9 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000115433
InParanoidiQ04734
OMAiDWPGWLM
OrthoDBiEOG092C4IJ1

Family and domain databases

InterProiView protein in InterPro
IPR009571 SUR7/Rim9-like_fungi
PfamiView protein in Pfam
PF06687 SUR7, 1 hit

Sequencei

Sequence statusi: Complete.

Q04734-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSMIHIVVF LLAITTMFEI LPLITVPVTK YLSLSSFRNH YYGLFGWCVR
60 70 80 90 100
GQNQELMCTK MKIGYDSTDV DSSGHVLTLP SNSKVVVSNL LVVHPISLAF
110 120 130 140 150
TGTLLILAVI IMVTPLGDSP EMLLFTALFS LPTFMLCLLC FLVDILLFIS
160 170 180 190 200
KLDWPGWLML AATISVALCC SMLWVMRRVV SVKKYESQQS IAHACSMEQY
210 220 230
SISDIYQSKQ NGNSSEYEVA PTHTDSLIAP EVTYRGFIE
Length:239
Mass (Da):26,697
Last modified:November 1, 1997 - v1
Checksum:i8310BF42D5A27E10
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U86641 Genomic DNA Translation: AAC49630.1
Z48952 Genomic DNA Translation: CAA88788.1
M80615 Unassigned DNA No translation available.
BK006946 Genomic DNA Translation: DAA09961.1
PIRiS52823
RefSeqiNP_013779.1, NM_001182561.1

Genome annotation databases

EnsemblFungiiYMR063W; YMR063W; YMR063W
GeneIDi855085
KEGGisce:YMR063W

Similar proteinsi

Entry informationi

Entry nameiPALI_YEAST
AccessioniPrimary (citable) accession number: Q04734
Secondary accession number(s): D6VZN7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: March 28, 2018
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XIII
    Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

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