Q04690 (NF1_MOUSE) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 118.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Neurofibromin Alternative name(s): Neurofibromatosis-related protein NF-1 | ||
| Gene names |
| ||
| Organism | Mus musculus (Mouse) [Reference proteome] | ||
| Taxonomic identifier | 10090 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus![]() |
Protein attributes
| Sequence length | 2841 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity. |
| Tissue specificity | Isoform 1 is expressed predominantly in brain, spinal cord and testis. Isoform 2 is expressed predominantly in adrenal gland, kidney, ovary and lung. Isoform 3 is expressed predominantly in adrenal gland and isoform 4 is expressed mainly in the testis. |
| Sequence similarities | Contains 1 CRAL-TRIO domain. Contains 1 Ras-GAP domain. |
Ontologies
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 2 (identifier: Q04690-1) Also known as: Type II; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 1 (identifier: Q04690-2) Also known as: Type I; The sequence of this isoform differs from the canonical sequence as follows: 1373-1393: Missing. | ||||||
| Isoform 3 (identifier: Q04690-3) The sequence of this isoform differs from the canonical sequence as follows: 1394-1406: VVSQRFPQNSIGA → VPKSSCFSCLNNRWLASASLRTASVP 1407-2841: Missing. | ||||||
| Isoform 4 (identifier: Q04690-4) The sequence of this isoform differs from the canonical sequence as follows: 1373-1393: Missing. 1394-1406: VVSQRFPQNSIGA → VPKSSCFSCLNNRWLASASLRTASVP 1407-2841: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Initiator methionine | 1 | 1 | Removed By similarity | ||||||
| Chain | 2 – 2841 | 2840 | Neurofibromin | PRO_0000056666 | |||||
Regions | |||||||||
| Domain | 1237 – 1453 | 217 | Ras-GAP | ||||||
| Domain | 1582 – 1740 | 159 | CRAL-TRIO | ||||||
| Compositional bias | 1354 – 1357 | 4 | Poly-Ser | ||||||
Amino acid modifications | |||||||||
| Modified residue | 2 | 1 | N-acetylalanine By similarity | ||||||
| Modified residue | 866 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 878 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 2190 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 2516 | 1 | Phosphothreonine Ref.5 | ||||||
| Modified residue | 2517 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 2523 | 1 | Phosphoserine By similarity | ||||||
| Modified residue | 2545 | 1 | Phosphoserine Ref.6 | ||||||
| Modified residue | 2819 | 1 | Phosphoserine Ref.6 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1373 – 1393 | 21 | Missing in isoform 1 and isoform 4. | VSP_001633 | |||||
| Alternative sequence | 1394 – 1406 | 13 | VVSQR…NSIGA → VPKSSCFSCLNNRWLASASL RTASVP in isoform 3 and isoform 4. | VSP_001634 | |||||
| Alternative sequence | 1407 – 2841 | 1435 | Missing in isoform 3 and isoform 4. | VSP_001635 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Mouse neurofibromatosis type 1 cDNA sequence reveals high degree of conservation of both coding and non-coding mRNA segments." Bernards A., Snijders A.J., Hannigan G.E., Murthy A.E., Gusella J.F. Hum. Mol. Genet. 2:645-650(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA]. Strain: BALB/c. Tissue: Brain. |
| [2] | "A novel isoform of the neurofibromatosis type-1 mRNA and a switch of isoforms during murine cell differentiation and proliferation." Mantani A., Makasugi S., Yokota Y., Abe K., Ushio Y., Yamamura K. Gene 148:245-251(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 1178-1555, ALTERNATIVE SPLICING. |
| [3] | "Sequence homology shared by neurofibromatosis type-1 gene and IRA-1 and IRA-2 negative regulators of the RAS cyclic AMP pathway." Buchberg A.M., Cleveland L.S., Jenkins N.A., Copeland N.G. Nature 347:291-294(1990) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE OF 1950-2568. |
| [4] | Lubec G., Sunyer B., Chen W.-Q. Submitted (JAN-2009) to UniProtKB Cited for: PROTEIN SEQUENCE OF 1973-1979, MASS SPECTROMETRY. Strain: OF1. Tissue: Hippocampus. |
| [5] | "Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations." Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M. Mol. Cell. Proteomics 6:283-293(2007) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-2516, MASS SPECTROMETRY. Tissue: Brain cortex. |
| [6] | "Solid tumor proteome and phosphoproteome analysis by high resolution mass spectrometry." Zanivan S., Gnad F., Wickstroem S.A., Geiger T., Macek B., Cox J., Faessler R., Mann M. J. Proteome Res. 7:5314-5326(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-2545 AND SER-2819, MASS SPECTROMETRY. Tissue: Melanoma. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | L10369, L10367, L10368 Genomic DNA. Translation: AAA39806.1. L10370 mRNA. Translation: AAA68132.1. X54924 mRNA. Translation: CAA38690.1. D30730 mRNA. Translation: BAA06395.1. D30731 mRNA. Translation: BAA06396.1. |
| IPI | IPI00108783. IPI00223398. IPI00223399. IPI00223400. |
| PIR | I53855. I54352. I67934. I68623. |
| RefSeq | NP_035027.1. NM_010897.2. |
| UniGene | Mm.255596. Mm.488324. |
3D structure databases | |
| ProteinModelPortal | Q04690. |
| SMR | Q04690. Positions 1208-1552, 1583-1839. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q04690. 5 interactions. |
PTM databases | |
| PhosphoSite | Q04690. |
Proteomic databases | |
| PaxDb | Q04690. |
| PRIDE | Q04690. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENSMUST00000071325; ENSMUSP00000071289; ENSMUSG00000020716. ENSMUST00000108251; ENSMUSP00000103886; ENSMUSG00000020716. |
| GeneID | 18015. |
| KEGG | mmu:18015. |
Organism-specific databases | |
| CTD | 4763. |
| MGI | MGI:97306. Nf1. |
Phylogenomic databases | |
| eggNOG | COG5261. |
| GeneTree | ENSGT00550000074797. |
| HOGENOM | HOG000047020. |
| HOVERGEN | HBG006486. |
| InParanoid | Q04690. |
| KO | K08052. |
| OMA | RRIEHPT. |
| OrthoDB | EOG4MPHP6. |
Gene expression databases | |
| ArrayExpress | Q04690. |
| Bgee | Q04690. |
| CleanEx | MM_NF1. |
| Genevestigator | Q04690. |
| GermOnline | ENSMUSG00000020716. Mus musculus. |
Family and domain databases | |
| Gene3D | 1.25.10.10. 5 hits. |
| InterPro | IPR011989. ARM-like. IPR016024. ARM-type_fold. IPR001251. CRAL-TRIO_dom. IPR001936. RasGAP. IPR023152. RasGAP_CS. IPR008936. Rho_GTPase_activation_prot. [Graphical view] |
| Pfam | PF00616. RasGAP. 1 hit. [Graphical view] |
| SMART | SM00323. RasGAP. 1 hit. SM00516. SEC14. 1 hit. [Graphical view] |
| SUPFAM | SSF48371. ARM-type_fold. 2 hits. SSF48350. Rho_GAP. 1 hit. |
| PROSITE | PS50191. CRAL_TRIO. 1 hit. PS00509. RAS_GTPASE_ACTIV_1. 1 hit. PS50018. RAS_GTPASE_ACTIV_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | NF1. mouse. |
| NextBio | 293049. |
| SOURCE | Search... |
Entry information
| Entry name | NF1_MOUSE | ||||||||
| Accession | Primary (citable) accession number: Q04690 Secondary accession number(s): Q61956, Q61957 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
