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UniProtKB/Swiss-Prot Q04671 (P_HUMAN)
Last modified
June 16, 2009.
Version 98.
History...
Clusters with 100%,
90%,
50% identity |
Documents (6) |
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Names and origin
| Protein names | Recommended name: P protein Alternative name(s): Melanocyte-specific transporter protein Pink-eyed dilution protein homolog | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 838 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Could be involved in the transport of tyrosine, the precursor to melanin synthesis, within the melanocyte. Regulates the pH of melanosome and the melanosome maturation. One of the components of the mammalian pigmentary system. Seems to regulate the post-translational processing of tyrosinase, which catalyzes the limiting reaction in melanin synthesis. May serve as a key control point at which ethnic skin color variation is determined. Major determinant of brown and/or blue eye color. Ref.2 Ref.5 Ref.7 |
| Subcellular location | |
| Polymorphism | Genetic variations in OCA2 are associated with skin/hair/eye pigmentation variability type 1 (SHEP1) [MIM:227220]; also known as skin/hair/eye pigmentation type 1, blue/nonblue eyes or skin/hair/eye pigmentation type 1, blue/brown eyes or skin/hair/eye pigmentation type 1, blond/brown hair or eye color, brown/blue or eye color, blue/nonblue or eye color type 3 (EYCL3) or brown eye color type 2 (BEY2) or hair color type 3 (HCL3). Hair, eye and skin pigmentation are among the most visible examples of human phenotypic variation, with a broad normal range that is subject to substantial geographic stratification. In the case of skin, individuals tend to have lighter pigmentation with increasing distance from the equator. By contrast, the majority of variation in human eye and hair color is found among individuals of European ancestry, with most other human populations fixed for brown eyes and black hair. |
| Involvement in disease | Defects in OCA2 are the cause of oculocutaneous albinism type 2 (OCA2) [MIM:203200]. OCA2 is an autosomal recessive form of albinism, a disorder of pigmentation in the skin, hair, and eyes. The phenotype of patients with OCA2 is typically somewhat less severe than in those with tyrosinase-deficient OCA1. There are several forms of OCA2, from typical OCA to relatively mild 'autosomal recessive ocular albinism' (AROA). OCA2 is the most prevalent type of albinism throughout the world. Ref.4 Ref.9 Ref.10 Ref.11 Ref.12 Ref.13 Ref.14 Ref.16 Ref.17 Ref.18 Ref.23 The gene OCA2 is localized to chromosome 15 at 15q11.2-q12, a region associated with Prader-Willi and Angelman syndromes, suggesting that altered expression of the OCA2 gene may be responsible for the hypopygmentation phenotype exhibited by certain individuals with these disorders. Ref.4 Human pigmentation, including eye color, has been associated with skin cancer risk. Ref.4 |
| Sequence similarities | Belongs to the citM (TC 2.A.11) transporter family. [View classification] |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transport |
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Disease | Albinism Disease mutation |
| Domain | Transmembrane |
| PTM | Glycoprotein |
| Gene Ontology (GO) | |
| Biological process | citrate transport Inferred from electronic annotation. Source: InterPro eye pigment biosynthetic process Ref.1Traceable author statement. Source: ProtInc |
| Cellular component | integral to membrane Ref.1 Traceable author statement. Source: ProtInc melanosome membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | L-tyrosine transmembrane transporter activity Ref.2 Traceable author statement. Source: ProtInc arsenite transmembrane transporter activityInferred from electronic annotation. Source: InterPro citrate transmembrane transporter activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q04671-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q04671-2) The sequence of this isoform differs from the canonical sequence as follows: 349-372: Missing. | ||||||
| Isoform 3 (identifier: Q04671-3) The sequence of this isoform differs from the canonical sequence as follows: 652-668: WIAILGAIWLLILADIH → GLGLVQAGRYYLSTPES 669-838: Missing. | ||||||
| Note: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 838 | 838 | P protein | PRO_0000172509 | |||||
Regions | |||||||||
| Topological domain | 1 – 179 | 179 | Cytoplasmic Potential | ||||||
| Transmembrane | 180 – 197 | 18 | Potential | ||||||
| Topological domain | 198 – 330 | 133 | Extracellular Potential | ||||||
| Transmembrane | 331 – 347 | 17 | Potential | ||||||
| Topological domain | 348 – 353 | 6 | Cytoplasmic Potential | ||||||
| Transmembrane | 354 – 370 | 17 | Potential | ||||||
| Topological domain | 371 – 384 | 14 | Extracellular Potential | ||||||
| Transmembrane | 385 – 401 | 17 | Potential | ||||||
| Topological domain | 402 – 423 | 22 | Cytoplasmic Potential | ||||||
| Transmembrane | 424 – 440 | 17 | Potential | ||||||
| Topological domain | 441 – 513 | 73 | Extracellular Potential | ||||||
| Transmembrane | 514 – 530 | 17 | Potential | ||||||
| Topological domain | 531 – 620 | 90 | Cytoplasmic Potential | ||||||
| Transmembrane | 621 – 637 | 17 | Potential | ||||||
| Topological domain | 638 – 647 | 10 | Extracellular Potential | ||||||
| Transmembrane | 648 – 664 | 17 | Potential | ||||||
| Topological domain | 665 – 679 | 15 | Cytoplasmic Potential | ||||||
| Transmembrane | 680 – 696 | 17 | Potential | ||||||
| Topological domain | 697 – 720 | 24 | Extracellular Potential | ||||||
| Transmembrane | 721 – 737 | 17 | Potential | ||||||
| Topological domain | 738 – 760 | 23 | Cytoplasmic Potential | ||||||
| Transmembrane | 761 – 777 | 17 | Potential | ||||||
| Topological domain | 778 – 817 | 40 | Extracellular Potential | ||||||
| Transmembrane | 818 – 834 | 17 | Potential | ||||||
| Topological domain | 835 – 838 | 4 | Cytoplasmic Potential | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 214 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 218 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 273 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 442 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 781 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 349 – 372 | 24 | Missing in isoform 2. | VSP_012284 | |||||
| Alternative sequence | 652 – 668 | 17 | WIAIL…LADIH → GLGLVQAGRYYLSTPES in isoform 3. | VSP_012285 | |||||
| Alternative sequence | 669 – 838 | 170 | Missing in isoform 3. | VSP_012286 | |||||
| Natural variant | 10 | 1 | R → W in OCA2. Ref.18 | VAR_020622 | |||||
| Natural variant | 27 | 1 | G → R in OCA2. | VAR_006117 | |||||
| Natural variant | 86 | 1 | S → R in OCA2. Ref.12 | VAR_006118 | |||||
| Natural variant | 112 | 1 | C → F in OCA2. Ref.12 | VAR_006119 | |||||
| Natural variant | 198 | 1 | P → L in OCA2. Ref.18 | VAR_020623 | |||||
| Natural variant | 206 – 211 | 6 | Missing in OCA2; severe. Ref.18 | VAR_006120 | |||||
| Natural variant | 211 | 1 | P → L in OCA2. Ref.18 | VAR_020624 | |||||
| Natural variant | 241 | 1 | P → R: dbSNP rs2305253. | VAR_022019 | |||||
| Natural variant | 257 | 1 | A → D: dbSNP rs1050968. Ref.12 Ref.1 | VAR_006121 | |||||
| Natural variant | 266 | 1 | R → W: dbSNP rs33929465. | VAR_032094 | |||||
| Natural variant | 273 – 274 | 2 | NW → KV in OCA2. | VAR_006122 | |||||
| Natural variant | 290 | 1 | R → G in OCA2. Ref.13 Ref.16 | VAR_020625 | |||||
| Natural variant | 305 | 1 | R → W Polymorphism associated with nonblue eye color; could be a biomarker of cutaneous cancer risk. dbSNP rs1800401. Ref.2 Ref.13 Ref.15 Ref.19 | VAR_006123 | |||||
| Natural variant | 334 | 1 | A → V in OCA2. Ref.14 | VAR_020626 | |||||
| Natural variant | 336 | 1 | A → V: dbSNP rs34010619. | VAR_032095 | |||||
| Natural variant | 350 | 1 | V → M in unclassified OCA. Ref.14 | VAR_020627 | |||||
| Natural variant | 368 | 1 | A → V in OCA2. Ref.12 | VAR_006124 | |||||
| Natural variant | 370 | 1 | I → T in unclassified OCA. dbSNP rs34731820. Ref.14 | VAR_020628 | |||||
| Natural variant | 385 | 1 | F → I in OCA2; severe. | VAR_006125 | |||||
| Natural variant | 387 | 1 | T → M Ref.18 | VAR_020629 | |||||
| Natural variant | 394 | 1 | M → I in OCA2. Ref.18 | VAR_020630 | |||||
| Natural variant | 395 | 1 | M → L in OCA2; severe. | VAR_006126 | |||||
| Natural variant | 404 | 1 | T → M in OCA2. | VAR_006127 | |||||
| Natural variant | 419 | 1 | R → Q Polymorphism associated with green/hazel eye color. dbSNP rs1800407. Ref.2 Ref.13 Ref.15 Ref.19 | VAR_006128 | |||||
| Natural variant | 419 | 1 | R → W in OCA2. | VAR_006129 | |||||
| Natural variant | 425 | 1 | Missing in OCA2; mild. | VAR_006130 | |||||
| Natural variant | 440 | 1 | L → F: dbSNP rs1800408. Ref.2 | VAR_007939 | |||||
| Natural variant | 440 | 1 | L → H Ref.2 | VAR_006131 | |||||
| Natural variant | 443 | 1 | V → I in OCA2. Ref.13 Ref.16 Ref.23 | VAR_006132 | |||||
| Natural variant | 446 | 1 | M → V in OCA2; mild; AROA form. | VAR_006133 | |||||
| Natural variant | 473 | 1 | I → S in OCA2. | VAR_006134 | |||||
| Natural variant | 476 | 1 | N → D in OCA2. Ref.23 | VAR_043700 | |||||
| Natural variant | 481 | 1 | A → T in OCA2. Ref.17 Ref.18 | VAR_007940 | |||||
| Natural variant | 489 | 1 | N → D in OCA2; mild/severe. Ref.16 | VAR_006135 | |||||
| Natural variant | 519 | 1 | V → A: dbSNP rs41446944. | VAR_032096 | |||||
| Natural variant | 549 | 1 | H → Q in OCA2. | VAR_006136 | |||||
| Natural variant | 560 | 1 | R → H: dbSNP rs35110389. | VAR_032097 | |||||
| Natural variant | 592 | 1 | T → I in OCA2. dbSNP rs1800413. Ref.12 | VAR_006137 | |||||
| Natural variant | 614 | 1 | K → E in OCA2. Ref.13 | VAR_020631 | |||||
| Natural variant | 614 | 1 | K → N in OCA2. Ref.13 | VAR_006138 | |||||
| Natural variant | 615 | 1 | H → R: dbSNP rs1800414. Ref.2 Ref.18 | VAR_006139 | |||||
| Natural variant | 617 | 1 | I → L in OCA2. Ref.13 | VAR_020632 | |||||
| Natural variant | 652 | 1 | W → R in OCA2. | VAR_006140 | |||||
| Natural variant | 678 | 1 | E → K in unclassified OCA. Ref.14 | VAR_020633 | |||||
| Natural variant | 679 | 1 | W → C in OCA2. Ref.13 Ref.16 | VAR_020634 | |||||
| Natural variant | 679 | 1 | W → R in OCA2; severe. Ref.13 Ref.16 | VAR_006141 | |||||
| Natural variant | 688 | 1 | L → F in unclassified OCA. Ref.14 | VAR_020635 | |||||
| Natural variant | 720 | 1 | R → C in OCA2. Ref.13 | VAR_020636 | |||||
| Natural variant | 722 | 1 | I → T: dbSNP rs1800417. Ref.2 | VAR_006142 | |||||
| Natural variant | 724 | 1 | A → P in OCA2. Ref.12 | VAR_006143 | |||||
| Natural variant | 736 | 1 | S → L in OCA2. | VAR_006144 | |||||
| Natural variant | 743 | 1 | P → L in OCA2 and unclassified OCA. | VAR_006145 | |||||
| Natural variant | 773 | 1 | A → T in a breast cancer sample; somatic mutation. Ref.21 | VAR_036468 | |||||
| Natural variant | 775 | 1 | G → R in OCA2. Ref.23 | VAR_043701 | |||||
| Natural variant | 787 | 1 | A → V in OCA2. Ref.12 | VAR_006146 | |||||
| Natural variant | 795 | 1 | G → R in OCA2. Ref.13 | VAR_020637 | |||||
| Natural variant | 799 | 1 | Q → H in OCA2. Ref.17 | VAR_020638 | |||||
| Natural variant | 827 | 1 | Y → H in OCA2. Ref.23 | VAR_043702 | |||||
| Natural variant | 833 | 1 | Missing in OCA2. Ref.13 | VAR_021682 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "A gene for the mouse pink-eyed dilution locus and for human type II oculocutaneous albinism." Rinchik E.M., Bultman S.J., Horsthemke B., Lee S.-T., Strunk K.M., Spritz R.A., Avidano K.A., Jong M.T.C., Nicholls R.D. Nature 361:72-76(1993) [PubMed: 8421497] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 3), VARIANT ASP-257. |
| [2] | "Organization and sequence of the human P gene and identification of a new family of transport proteins." Lee S.-T., Nicholls R.D., Jong M.T.C., Fukai K., Spritz R.A. Genomics 26:354-363(1995) [PubMed: 7601462] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORMS 1 AND 3), FUNCTION, SUBCELLULAR LOCATION, VARIANTS TRP-305; GLN-419; PHE-440; ARG-615 AND THR-722. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Skin. |
| [4] | "The mouse pink-eyed dilution gene: association with human Prader-Willi and Angelman syndromes." Gardner J.M., Nakatsu Y., Gondo Y., Lee S., Lyon M.F., King R.A., Brilliant M.H. Science 257:1121-1124(1992) [PubMed: 1509264] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 288-419, DISEASE. Tissue: Skin. |
| [5] | "The mouse p (pink-eyed dilution) and human P genes, oculocutaneous albinism type 2 (OCA2), and melanosomal pH." Brilliant M.H. Pigment Cell Res. 14:86-93(2001) [PubMed: 11310796] [Abstract] Cited for: FUNCTION. |
| [6] | "Inverse correlation between pink-eyed dilution protein expression and induction of melanogenesis by bafilomycin A1." Manga P., Orlow S.J. Pigment Cell Res. 14:362-367(2001) [PubMed: 11601658] [Abstract] Cited for: POSSIBLE INVOLVEMENT IN SKIN COLOR VARIATION. |
| [7] | "Eye colour: portals into pigmentation genes and ancestry." Sturm R.A., Frudakis T.N. Trends Genet. 20:327-332(2004) [PubMed: 15262401] [Abstract] Cited for: FUNCTION. |
| [8] | "Molecular basis of albinism: mutations and polymorphisms of pigmentation genes associated with albinism." Oetting W.S., King R.A. Hum. Mutat. 13:99-115(1999) [PubMed: 10094567] [Abstract] Cited for: REVIEW ON OCA2 VARIANTS. |
| [9] | "Diverse mutations of the P gene among African-Americans with type II (tyrosinase-positive) oculocutaneous albinism (OCA2)." Lee S.-T., Nicholls R.D., Schnur R.E., Guida L.C., Lu-Kuo J., Spinner N.B., Zackai E.H., Spritz R.A. Hum. Mol. Genet. 3:2047-2051(1994) [PubMed: 7874125] [Abstract] Cited for: VARIANTS OCA2. |
| [10] | "Frequent intragenic deletion of the P gene in Tanzanian patients with type II oculocutaneous albinism (OCA2)." Spritz R.A., Fukai K., Holmes S.A., Luande J. Am. J. Hum. Genet. 56:1320-1323(1995) [PubMed: 7762554] [Abstract] Cited for: VARIANTS OCA2. |
| [11] | "Novel mutations of the P gene in type II oculocutaneous albinism (OCA2)." Spritz R.A., Lee S.-T., Fukai K., Brondum-Nielsen K., Chitayat D., Lipson M.H., Musarella M.A., Rosenmann A., Weleber R.G. Hum. Mutat. 10:175-177(1997) [PubMed: 9259203] [Abstract] Cited for: VARIANTS OCA2. |
| [12] | "Mutations of the human P gene associated with type II oculocutaneous albinism (OCA2)." Oetting W.S., Gardner J.M., Fryer J.P., Ching A., Durham-Pierre D., King R.A., Brilliant M.H. Hum. Mutat. 12:434-434(1998) [PubMed: 10671067] [Abstract] Cited for: VARIANTS OCA2 ARG-86; PHE-112; VAL-368; ILE-592; PRO-724 AND VAL-787, VARIANT ASP-257. |
| [13] | "Novel and recurrent mutations in the tyrosinase gene and the P gene in the German albino population." Passmore L.A., Kaesmann-Kellner B., Weber B.H.F. Hum. Genet. 105:200-210(1999) [PubMed: 10987646] [Abstract] Cited for: VARIANTS OCA2 GLY-290; ILE-443; GLU-614; LEU-617; CYS-679; CYS-720; ARG-795 AND VAL-833 DEL, VARIANTS TRP-305 AND GLN-419. |
| [14] | "Identification of P gene mutations in individuals with oculocutaneous albinism in sub-Saharan Africa." Kerr R., Stevens G., Manga P., Salm S., John P., Haw T., Ramsay M. Hum. Mutat. 15:166-172(2000) [PubMed: 10649493] [Abstract] Cited for: VARIANT OCA2 VAL-334, VARIANTS UNCLASSIFIED OCA MET-350; THR-370; LYS-678; PHE-688 AND LEU-743. |
| [15] | "P gene as an inherited biomarker of human eye color." Rebbeck T.R., Kanetsky P.A., Walker A.H., Holmes R., Halpern A.C., Schuchter L.M., Elder D.E., Guerry D. Cancer Epidemiol. Biomarkers Prev. 11:782-784(2002) [PubMed: 12163334] [Abstract] Cited for: VARIANTS TRP-305 AND GLN-419, INVOLVEMENT IN DETERMINATION OF EYE COLOR, INVOLVEMENT IN SKIN CANCER RISK. |
| [16] | "MC1R mutations modify the classic phenotype of oculocutaneous albinism type 2 (OCA2)." King R.A., Willaert R.K., Schmidt R.M., Pietsch J., Savage S., Brott M.J., Fryer J.P., Summers C.G., Oetting W.S. Am. J. Hum. Genet. 73:638-645(2003) [PubMed: 12876664] [Abstract] Cited for: VARIANTS OCA2 GLY-290; ILE-443; ASP-489; CYS-679 AND LEU-743. |
| [17] | "A novel P gene missense mutation in a Japanese patient with oculocutaneous albinism type II (OCA2)." Kato A., Fukai K., Oiso N., Hosomi N., Saitoh S., Wada T., Shimizu H., Ishii M. J. Dermatol. Sci. 31:189-192(2003) [PubMed: 12727022] [Abstract] Cited for: VARIANTS OCA2 THR-481 AND HIS-799. |
| [18] | "Six novel P gene mutations and oculocutaneous albinism type 2 frequency in Japanese albino patients." Suzuki T., Miyamura Y., Matsunaga J., Shimizu H., Kawachi Y., Ohyama N., Ishikawa O., Ishikawa T., Terao H., Tomita Y. J. Invest. Dermatol. 120:781-783(2003) [PubMed: 12713581] [Abstract] Cited for: VARIANTS OCA2 TRP-10; LEU-198; LEU-211; ILE-394 AND THR-481, VARIANTS MET-387 AND ARG-615. |
| [19] | "Allele variations in the OCA2 gene (pink-eyed-dilution locus) are associated with genetic susceptibility to melanoma." Melan-Cohort Jannot A.-S., Meziani R., Bertrand G., Gerard B., Descamps V., Archimbaud A., Picard C., Ollivaud L., Basset-Seguin N., Kerob D., Lanternier G., Lebbe C., Saiag P., Crickx B., Clerget-Darpoux F., Grandchamp B., Soufir N. Eur. J. Hum. Genet. 13:913-920(2005) [PubMed: 15889046] [Abstract] Cited for: VARIANTS TRP-305 AND GLN-419, INVOLVEMENT IN SUSCEPTIBILITY TO MELANOMA. |
| [20] | "A three-single-nucleotide polymorphism haplotype in intron 1 of OCA2 explains most human eye-color variation." Duffy D.L., Montgomery G.W., Chen W., Zhao Z.Z., Le L., James M.R., Hayward N.K., Martin N.G., Sturm R.A. Am. J. Hum. Genet. 80:241-252(2007) [PubMed: 17236130] [Abstract] Cited for: INVOLVEMENT IN SHEP1. |
| [21] | "The consensus coding sequences of human breast and colorectal cancers." Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D., Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S., Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J., Dawson D., Willson J.K.V. Velculescu V.E.Science 314:268-274(2006) [PubMed: 16959974] [Abstract] Cited for: VARIANT [LARGE SCALE ANALYSIS] THR-773. |
| [22] | "Genetic determinants of hair, eye and skin pigmentation in Europeans." Sulem P., Gudbjartsson D.F., Stacey S.N., Helgason A., Rafnar T., Magnusson K.P., Manolescu A., Karason A., Palsson A., Thorleifsson G., Jakobsdottir M., Steinberg S., Palsson S., Jonasson F., Sigurgeirsson B., Thorisdottir K., Ragnarsson R., Benediktsdottir K.R. Stefansson K.Nat. Genet. 39:1443-1452(2007) [PubMed: 17952075] [Abstract] Cited for: INVOLVEMENT IN SHEP1. |
| [23] | "Prenatal diagnosis of oculocutaneous albinism type II and novel mutations in two Chinese families." Hongyi L., Haiyun W., Hui Z., Qing W., Honglei D., Shu M., Weiying J. Prenat. Diagn. 27:502-506(2007) [PubMed: 17385796] [Abstract] Cited for: VARIANTS OCA2 ILE-443; ASP-476; ARG-775 AND HIS-827. |
| [24] | "Three genome-wide association studies and a linkage analysis identify HERC2 as a human iris color gene." Kayser M., Liu F., Janssens A.C.J.W., Rivadeneira F., Lao O., van Duijn K., Vermeulen M., Arp P., Jhamai M.M., van Ijcken W.F.J., den Dunnen J.T., Heath S., Zelenika D., Despriet D.D.G., Klaver C.C.W., Vingerling J.R., de Jong P.T.V.M., Hofman A. van Duijn C.M.Am. J. Hum. Genet. 82:411-423(2008) [PubMed: 18252221] [Abstract] Cited for: INVOLVEMENT IN SHEP1. |
| [25] | "A single SNP in an evolutionary conserved region within intron 86 of the HERC2 gene determines human blue-brown eye color." Sturm R.A., Duffy D.L., Zhao Z.Z., Leite F.P.M., Stark M.S., Hayward N.K., Martin N.G., Montgomery G.W. Am. J. Hum. Genet. 82:424-431(2008) [PubMed: 18252222] [Abstract] Cited for: INVOLVEMENT IN SHEP1 AND INVOLVEMENT IN SUSCEPTIBILITY TO MELANOMA. |
| [26] | "Blue eye color in humans may be caused by a perfectly associated founder mutation in a regulatory element located within the HERC2 gene inhibiting OCA2 expression." Eiberg H., Troelsen J., Nielsen M., Mikkelsen A., Mengel-From J., Kjaer K.W., Hansen L. Hum. Genet. 123:177-187(2008) [PubMed: 18172690] [Abstract] Cited for: INVOLVEMENT IN SHEP1. |
| + | Additional computationally mapped references. |
Web resources
| Mutations of the P gene Retina International's Scientific Newsletter |
| Albinism database (ADB) P mutations |
| Protein Spotlight Questioning colour - Issue 54 of January 2005 |
| GeneReviews |
Cross-references
Sequence databases | |
|---|---|
| M99564 mRNA. Translation: AAA36477.1. U19170 U19155 Genomic DNA. Translation: AAC13783.1. U19176 U19175 Genomic DNA. Translation: AAC13784.1. BC012097 mRNA. Translation: AAH12097.1. M97901 mRNA. Translation: AAA36430.1. | |
| IPI | IPI00028627. IPI00150205. IPI00513686. |
| PIR | A57173. S28911. |
| RefSeq | NP_000266.2. |
| UniGene | Hs.654411 |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| TCDB | 2.A.45.2.1. arsenite-antimonite (ArsB) efflux family. |
PTM databases | |
| PhosphoSite | Q04671. |
Proteomic databases | |
| PRIDE | Q04671. |
Genome annotation databases | |
| Ensembl | ENSG00000104044. Homo sapiens. [Contig view] |
| GeneID | 4948. |
| KEGG | hsa:4948. |
Organism-specific databases | |
| GeneCards | GC15M025673. |
| HGNC | HGNC:8101. OCA2. |
| MIM | 203200. phenotype. 227220. phenotype. 611409. gene. |
| Orphanet | 55. Oculocutaneous albinism. 739. Prader-Willi syndrome. |
| PharmGKB | PA31890. |
| GenAtlas | Search... |
Phylogenomic databases | |
| HOGENOM | Q04671. |
| HOVERGEN | Q04671. |
| OMA | Q04671. PQQVTHN. |
Gene expression databases | |
| ArrayExpress | Q04671. |
| Bgee | Q04671. |
| CleanEx | HS_OCA2. |
| GermOnline | ENSG00000104044. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000802. Ars_pump. IPR004680. Divalent_ion_symporter. [Graphical view] |
| Pfam | PF03600. CitMHS. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00935. 2a45. 1 hit. |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 19061. |
| SOURCE | Search... |
Entry information
| Entry name | P_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q04671 Secondary accession number(s): Q15211 Q9UMI5 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 15 Human chromosome 15: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| Protein Spotlight Protein Spotlight articles and cited UniProtKB/Swiss-Prot entries |
| SIMILARITY comments Index of protein domains and families |

Clusters with


