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Protein

Uncharacterized protein YMR196W

Gene

YMR196W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciYEAST:G3O-32883-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YMR196W
Gene namesi
Ordered Locus Names:YMR196W
ORF Names:YM9646.09
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311 Componenti: Chromosome XIII

Organism-specific databases

CYGDiYMR196w.
EuPathDBiFungiDB:YMR196W.
SGDiS000004809. YMR196W.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10881088Uncharacterized protein YMR196WPRO_0000203326Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei299 – 2991Phosphoserine1 Publication
Modified residuei984 – 9841Phosphoserine1 Publication
Modified residuei1013 – 10131Phosphothreonine1 Publication
Modified residuei1081 – 10811Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ04336.
PaxDbiQ04336.
PeptideAtlasiQ04336.

Interactioni

Protein-protein interaction databases

BioGridi35374. 27 interactions.
DIPiDIP-6550N.
IntActiQ04336. 5 interactions.
MINTiMINT-708375.
STRINGi4932.YMR196W.

Structurei

3D structure databases

ProteinModelPortaliQ04336.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG82826.
GeneTreeiENSGT00390000017946.
HOGENOMiHOG000011547.
InParanoidiQ04336.
OMAiSYMKFLY.
OrthoDBiEOG7N0CD4.

Family and domain databases

InterProiIPR008928. 6-hairpin_glycosidase-like.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 2 hits.

Sequencei

Sequence statusi: Complete.

Q04336-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKLRDKFVD STVEEERLRE NRNHEKYWYR WGPYLSERSW ATVREDYSLN
60 70 80 90 100
GDAWSNFPFE HANARVFRWG EDGLFGVSDN KQLVCMNVAL WNGKDERLKE
110 120 130 140 150
RLFGLTGPQG NHGEDVKELY FYLDNTPTHS YMKALYKYPF KKAFPYKELV
160 170 180 190 200
QKNGERGYED KEFEVYDIDG LYRDSETGDN PYFDVFFEMA KDDENPSELN
210 220 230 240 250
FRLTIHNRSK IDSGELYIAP QLFFRNTWAF DGTRTKDKPL LERDAEAANL
260 270 280 290 300
INMTHKKYGN CQMVFQPSPG GFSSGTNEEE EDKEVEDIDP LLLFTDNESN
310 320 330 340 350
LVKLFNEEKN PSEYTKDAFE EYLVQGKTDA VNPENKGTKA CAVYHFKNIP
360 370 380 390 400
PGEYVTVRYK FTNDPKNSIF KAQNLAVVDE DEFDLIFDNR EEEADNFYWR
410 420 430 440 450
ITPLPISDEL RNLQRQAFSG LLWTKQFYNF TYDAWYNGDA NVKPRPPPNR
460 470 480 490 500
ANGRNKNWKH LYIEDILSMP DKWEYPFFAS WDTAFHCIPL AMIDPEFAKR
510 520 530 540 550
QLDLLTREWY MHPNGQIPAY EWNFNDVNPP VHAWAVYRVF KIERNMYNRE
560 570 580 590 600
DRTFLERVFQ KLLLNFTWWV NRKDTEGKNV FEGGFLGLDN IGVFNRSEPL
610 620 630 640 650
PTGGTLEQAD STGWMAFFSL QMLNIALELA KENPVYEDIA SKFFEHFILI
660 670 680 690 700
SDSMSFEYAT DITGEKCKEV IKQNLWNEAD KFYYDAISWG DHKVQLPIRS
710 720 730 740 750
LVGLIPLYAS MTLEPSIIKQ FRGFKKRVDW FVNNRPEIFD RNIASMSKKG
760 770 780 790 800
VGERLLLSLV TKERLTAILS RLLDETEFLS PYGIRSLSKY HEKHPFEMNV
810 820 830 840 850
NGVEYMVKYL PGESDSGMFG GNSNWRGPIW FPTSFLIMEA LQRFYLYYGS
860 870 880 890 900
DFKVECPVGS GDYLNLAEVA EELGYRMIHL FVPDENGERA IHYGDHSKFL
910 920 930 940 950
SSDPYFRDYV PFFEYFDGDT GRGLGASHQC GWTALVAKWI SDVGISCVRL
960 970 980 990 1000
PRTPRSSVAT TASTESSEQG PKMKRMARRK SAKSLVNYTA TILDLTEEEK
1010 1020 1030 1040 1050
RHHRIGGTHS GLTPQSSISS DKARHLMEEM NEEEGIHETV VPEDRHNFET
1060 1070 1080
KLIGKLKDKV KNMKVTDKAK DEDIDPMDPM SPLNKDVS
Length:1,088
Mass (Da):126,624
Last modified:November 1, 1997 - v1
Checksum:i36C2B42BB2749687
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z47815 Genomic DNA. Translation: CAA87818.1.
BK006946 Genomic DNA. Translation: DAA10095.1.
PIRiS50925.
RefSeqiNP_013923.1. NM_001182703.1.

Genome annotation databases

EnsemblFungiiYMR196W; YMR196W; YMR196W.
GeneIDi855236.
KEGGisce:YMR196W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z47815 Genomic DNA. Translation: CAA87818.1.
BK006946 Genomic DNA. Translation: DAA10095.1.
PIRiS50925.
RefSeqiNP_013923.1. NM_001182703.1.

3D structure databases

ProteinModelPortaliQ04336.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi35374. 27 interactions.
DIPiDIP-6550N.
IntActiQ04336. 5 interactions.
MINTiMINT-708375.
STRINGi4932.YMR196W.

Proteomic databases

MaxQBiQ04336.
PaxDbiQ04336.
PeptideAtlasiQ04336.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYMR196W; YMR196W; YMR196W.
GeneIDi855236.
KEGGisce:YMR196W.

Organism-specific databases

CYGDiYMR196w.
EuPathDBiFungiDB:YMR196W.
SGDiS000004809. YMR196W.

Phylogenomic databases

eggNOGiNOG82826.
GeneTreeiENSGT00390000017946.
HOGENOMiHOG000011547.
InParanoidiQ04336.
OMAiSYMKFLY.
OrthoDBiEOG7N0CD4.

Enzyme and pathway databases

BioCyciYEAST:G3O-32883-MONOMER.

Miscellaneous databases

NextBioi978780.
PROiQ04336.

Family and domain databases

InterProiIPR008928. 6-hairpin_glycosidase-like.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  4. "Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry."
    Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L., Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.
    Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
    Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
    Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-299; SER-984 AND SER-1081, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  6. "Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
    Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
    Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-1013, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYM54_YEAST
AccessioniPrimary (citable) accession number: Q04336
Secondary accession number(s): D6W021
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: June 24, 2015
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 2220 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XIII
    Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.