Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q04279 (YMX6_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YMR086W
Gene names
Ordered Locus Names:YMR086W
ORF Names:YM9582.10
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length960 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Cytoplasm Ref.4.

Ontologies

Keywords
   Cellular componentCytoplasm
   PTMPhosphoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processeisosome assembly

Inferred from mutant phenotype PubMed 22869600. Source: SGD

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

eisosome

Inferred from direct assay PubMed 19269952. Source: SGD

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 960960Uncharacterized protein YMR086W
PRO_0000203284

Amino acid modifications

Modified residue481Phosphoserine Ref.6
Modified residue2201Phosphoserine Ref.8
Modified residue2351Phosphoserine Ref.6
Modified residue2381Phosphoserine Ref.6
Modified residue3191Phosphoserine Ref.8
Modified residue3391Phosphoserine Ref.8
Modified residue3521Phosphoserine Ref.5 Ref.7 Ref.8
Modified residue4341Phosphoserine Ref.8
Modified residue4611Phosphoserine Ref.7 Ref.8
Modified residue4671Phosphothreonine Ref.8
Modified residue6301Phosphoserine Ref.8
Modified residue6751Phosphothreonine Ref.6 Ref.8
Modified residue7581Phosphoserine Ref.6
Modified residue8161Phosphoserine Ref.5 Ref.7 Ref.8
Modified residue8181Phosphoserine Ref.5 Ref.7 Ref.8
Modified residue8551Phosphoserine Ref.8

Experimental info

Sequence conflict1671G → E in AAT92595. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Q04279 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 05A4FA27129DB09B

FASTA960105,874
        10         20         30         40         50         60 
MFRRRTTAPE MEQADPTAVA AAASIGKLLM KKGNQSDNEQ RPTYRSASMT NLRKPSAPKR 

        70         80         90        100        110        120 
MSSISSISSE SRRSDGKGRP GKINSLTQRS SMGKGDSLNS PLTKEPQHKT RSHNRTSSLP 

       130        140        150        160        170        180 
NQRGQQSRNS SGLQRQKSKT HQRISYDEAQ RTFKDFGGPQ ARGILTGQHR TENPSGSIPL 

       190        200        210        220        230        240 
RTTRKYIPGP NGLVAIEVPV EKPSNANTSK LLRRSNSAHS ALNARNGSLL RKKVSQESLH 

       250        260        270        280        290        300 
SQPKKTSSLG NTSSTQAKKG QKAVQERNLA KKHPINSNVP LIETQVREET DQELKLDNSN 

       310        320        330        340        350        360 
SSESETVVNS ENNLEKPSSL NIEKDDLSKL IHENIELESF IEEKGKEKPL NSDQEDVFIS 

       370        380        390        400        410        420 
EKTVKGDVQW PKNNRQASTL EKTFNYDNEE KREGNKPVAE HPLPEAEVDD KSVEQLNNIS 

       430        440        450        460        470        480 
SSGSYSAQGS VENSKPENGN KNLENDTTSS PTQDLDEKSR SIEEKDTLEG TESSKKVEKP 

       490        500        510        520        530        540 
DNCCEKISGA NTSSKKGNVG DTKDEFFDTV EESDQKTSKS NSSKNTDHSN QTEPTPSLAQ 

       550        560        570        580        590        600 
YLRTSNTYLS RKNQSKQAEQ EKFHKPEAPM VPVTKVVTPI KSALKKSSGS SNHDSSMYSD 

       610        620        630        640        650        660 
NSPANGAYLS LTTAENTRLN AQMTMSDSVS RRASLKRSSI KRPQSVGQFR SIRSNSPSPP 

       670        680        690        700        710        720 
EKINNKRHSA IPLGTPEKGK PKRNSVMASL SKNSQQIQEP ASVYESNGPN KPKNQINKNI 

       730        740        750        760        770        780 
KRGSQIAQNN KPSTKDMNSI LYPKEPPPRK SSFEKTRSNE SHLGFKKLSL RNGNFEEALS 

       790        800        810        820        830        840 
ESYNGQASQN STNVNRTDTA QEFFKYLGHS SRFADSDSED ESQFFNQGPS KYNTETEGNK 

       850        860        870        880        890        900 
TSGNKNSNGG NGAFSLFKSK SKQKENNVVS PGVSSPNHTT TDPAITSKKV DKKFSGLSLR 

       910        920        930        940        950        960 
AASEAEPAKN SNPSMTNRLR FSSNPENGES RLPQAQEVSV TKEKKGSFGK KLKKIFGRKK 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII."
Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P. expand/collapse author list , Skelton J., Walsh S.V., Whitehead S., Barrell B.G.
Nature 387:90-93(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[4]"Subcellular localization of the yeast proteome."
Kumar A., Agarwal S., Heyman J.A., Matson S., Heidtman M., Piccirillo S., Umansky L., Drawid A., Jansen R., Liu Y., Cheung K.-H., Miller P., Gerstein M., Roeder G.S., Snyder M.
Genes Dev. 16:707-719(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION.
[5]"Large-scale phosphorylation analysis of alpha-factor-arrested Saccharomyces cerevisiae."
Li X., Gerber S.A., Rudner A.D., Beausoleil S.A., Haas W., Villen J., Elias J.E., Gygi S.P.
J. Proteome Res. 6:1190-1197(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-352; SER-816 AND SER-818, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
Strain: ADR376.
[6]"Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry."
Chi A., Huttenhower C., Geer L.Y., Coon J.J., Syka J.E.P., Bai D.L., Shabanowitz J., Burke D.J., Troyanskaya O.G., Hunt D.F.
Proc. Natl. Acad. Sci. U.S.A. 104:2193-2198(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-48; SER-235; SER-238; THR-675 AND SER-758, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[7]"A multidimensional chromatography technology for in-depth phosphoproteome analysis."
Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-352; SER-461; SER-816 AND SER-818, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[8]"Global analysis of Cdk1 substrate phosphorylation sites provides insights into evolution."
Holt L.J., Tuch B.B., Villen J., Johnson A.D., Gygi S.P., Morgan D.O.
Science 325:1682-1686(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-220; SER-319; SER-339; SER-352; SER-434; SER-461; THR-467; SER-630; THR-675; SER-816; SER-818 AND SER-855, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z49259 Genomic DNA. Translation: CAA89232.1.
AY692576 Genomic DNA. Translation: AAT92595.1.
BK006946 Genomic DNA. Translation: DAA09983.1.
PIRS54461.
RefSeqNP_013803.1. NM_001182586.1.

3D structure databases

ProteinModelPortalQ04279.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid35261. 37 interactions.
DIPDIP-6346N.
IntActQ04279. 3 interactions.
MINTMINT-2492235.
STRING4932.YMR086W.

Proteomic databases

PaxDbQ04279.
PRIDEQ04279.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYMR086W; YMR086W; YMR086W.
GeneID855110.
KEGGsce:YMR086W.

Organism-specific databases

CYGDYMR086w.
SGDS000004692. YMR086W.

Phylogenomic databases

eggNOGNOG12793.
GeneTreeENSGT00530000067521.
OMAPNIFANI.
OrthoDBEOG7B05SF.

Enzyme and pathway databases

BioCycYEAST:G3O-32786-MONOMER.

Gene expression databases

GenevestigatorQ04279.

Family and domain databases

ProtoNetSearch...

Other

NextBio978446.

Entry information

Entry nameYMX6_YEAST
AccessionPrimary (citable) accession number: Q04279
Secondary accession number(s): D6VZQ9, Q6B304
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: March 19, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XIII

Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD