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Protein
Submitted name:

ORF1 for putative RNA binding protein

Gene

gag

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
ORF1 for putative RNA binding proteinImported
Gene namesi
Name:gagImported
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Organism-specific databases

FlyBaseiFBgn0024789. Doc\gag.

PTM / Processingi

Proteomic databases

PeptideAtlasiQ04134.
PRIDEiQ04134.

Structurei

3D structure databases

ProteinModelPortaliQ04134.
SMRiQ04134. Positions 378-418.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini309 – 38274PRE_C2HCInterPro annotationAdd
BLAST

Family and domain databases

InterProiIPR006579. Pre_C2HC_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF07530. PRE_C2HC. 1 hit.
[Graphical view]
SMARTiSM00596. PRE_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.

Sequencei

Sequence statusi: Complete.

Q04134-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNQNDIRSQR QCEQDERRLS LQRNNAYFSF VSPQIGDRAP SPSTNSKLLP
60 70 80 90 100
SANDRPRSCS PSLPASAHKS WSEETASPTP LLSQRQTTVP GNCNTAITSA
110 120 130 140 150
VTSLATATTS TSSAAQLIIA VPAVNNSAAL TVCNNNNARK EESKQKQKSI
160 170 180 190 200
STVQTGMDRY IQIKRKLSPQ NNKAGNQPKI NRTNNGNENS AVNNSNRYAI
210 220 230 240 250
LADSATEQPN EKTVGEPKKT RPPPIFIREQ STNALVNKLV ALIGDSKFHI
260 270 280 290 300
IPLKKGNIHE IKLQIQTEAD HRIVTKYLND AGKNYYTYQL KSCKGLQVVL
310 320 330 340 350
KGIEATVTPA EIIEALKAKN FSAKTAINIL NKDKVPQPLF KIELEPELQA
360 370 380 390 400
LKKNEVHPIY NLQYLLHRRI TVEEPHKRIN PVQCTNCQEY GHTKAYCTLK
410 420 430 440 450
SVCVVCSEPH TTANCPKNKD DKSVKKCSNC GEKHTANYRG CVVYKELKSR
460 470 480 490 500
LNKRIATAHT YNKVNFYSPQ PIFQPPLTVP STTPTISFAS ALKSGLEVPA
510 520 530 540 550
PPTRTAHSEH TPTNIQQTQQ SGIEAMMLSL QQSMKDFMTF MQNTLQELMK
560
NQNILIQLLV SSKSP
Length:565
Mass (Da):62,740
Last modified:November 1, 1996 - v1
Checksum:i4D2291FCF568F7AA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X17551 Genomic DNA. Translation: CAA35586.1.
PIRiS13328.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X17551 Genomic DNA. Translation: CAA35586.1.
PIRiS13328.

3D structure databases

ProteinModelPortaliQ04134.
SMRiQ04134. Positions 378-418.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiQ04134.
PRIDEiQ04134.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

FlyBaseiFBgn0024789. Doc\gag.

Family and domain databases

InterProiIPR006579. Pre_C2HC_dom.
IPR001878. Znf_CCHC.
[Graphical view]
PfamiPF07530. PRE_C2HC. 1 hit.
[Graphical view]
SMARTiSM00596. PRE_C2HC. 1 hit.
[Graphical view]
SUPFAMiSSF57756. SSF57756. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "DNA sequence of the Doc retroposon in the white-one mutant of Drosophila melanogaster and of secondary insertions in the phenotypically altered derivatives white-honey and white-eosin."
    O'Hare K., Alley M.R., Cullingford T.E., Driver A., Sanderson M.J.
    Mol. Gen. Genet. 225:17-24(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: white-one mutantImported.

Entry informationi

Entry nameiQ04134_DROME
AccessioniPrimary (citable) accession number: Q04134
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.