Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot Q04110 (ECM11_YEAST)

Last modified June 16, 2009. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Protein ECM11
Alternative name(s):
    Extracellular mutant protein 11
Gene names
Name: ECM11
Ordered Locus Names: YDR446W
ORF Names: D9461.31
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length302 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Function

May be involved in cell wall organization and biogenesis.

Subunit structure

Interacts with CDC6. Ref.3

Subcellular location

Nucleus. Ref.4

Ontologies

Keywords
   Biological processCell wall biogenesis/degradation
   Cellular componentNucleus
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell wall organization Ref.2

Inferred from mutant phenotype. Source: SGD

reciprocal meiotic recombination

Inferred from mutant phenotype. Source: SGD

   Cellular componentnucleus Ref.4

Inferred from direct assay. Source: SGD

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

SMT3Q123061EBI-37150,EBI-17490
SNX4P470571EBI-37150,EBI-17610

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 302302Protein ECM11
PRO_0000086912

Sequences

Sequence LengthMass (Da)Tools
Q04110-1 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: CB6890F4EE069232

FASTA30234,113
        10         20         30         40         50         60 
MTVIKTEPTT EVTLYSPPSK ESLSKDDAHR KKQNNKPPSS INSRSGPNKH KLAAKAPEKK 

        70         80         90        100        110        120 
INNTDKQDLS AFLLNPSLIV KPSESKKKEN IVAYNDTPGI KTEHTAFQPL TPISKKRALK 

       130        140        150        160        170        180 
EKAASEKCDS FDLSRDEKPY IQKKSKTLSS VTEINSSEYK LSLNGENTSS PAKEKSQEPI 

       190        200        210        220        230        240 
ENPGSYQKTR NYLFEKPDPL DTCLQDYSSM LPSNVAEEDQ EYFISVADST LEEWTNKGQE 

       250        260        270        280        290        300 
IIDQQFQLYQ EIIKKRIELS YKFKGIISVI NDRADALEEQ GQQLEGKIKK VKTLANEILN 


II 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome IV."
Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G., Bargues M., Baron L., Becker A., Biteau N., Bloecker H., Blugeon C., Boskovic J., Brandt P., Brueckner M., Buitrago M.J., Coster F., Delaveau T. expand/collapse author list , del Rey F., Dujon B., Eide L.G., Garcia-Cantalejo J.M., Goffeau A., Gomez-Peris A., Granotier C., Hanemann V., Hankeln T., Hoheisel J.D., Jaeger W., Jimenez A., Jonniaux J.-L., Kraemer C., Kuester H., Laamanen P., Legros Y., Louis E.J., Moeller-Rieker S., Monnet A., Moro M., Mueller-Auer S., Nussbaumer B., Paricio N., Paulin L., Perea J., Perez-Alonso M., Perez-Ortin J.E., Pohl T.M., Prydz H., Purnelle B., Rasmussen S.W., Remacha M.A., Revuelta J.L., Rieger M., Salom D., Saluz H.P., Saiz J.E., Saren A.-M., Schaefer M., Scharfe M., Schmidt E.R., Schneider C., Scholler P., Schwarz S., Soler-Mira A., Urrestarazu L.A., Verhasselt P., Vissers S., Voet M., Volckaert G., Wagner G., Wambutt R., Wedler E., Wedler H., Woelfl S., Harris D.E., Bowman S., Brown D., Churcher C.M., Connor R., Dedman K., Gentles S., Hamlin N., Hunt S., Jones L., McDonald S., Murphy L.D., Niblett D., Odell C., Oliver K., Rajandream M.A., Richards C., Shore L., Walsh S.V., Barrell B.G., Dietrich F.S., Mulligan J.T., Allen E., Araujo R., Aviles E., Berno A., Carpenter J., Chen E., Cherry J.M., Chung E., Duncan M., Hunicke-Smith S., Hyman R.W., Komp C., Lashkari D., Lew H., Lin D., Mosedale D., Nakahara K., Namath A., Oefner P., Oh C., Petel F.X., Roberts D., Schramm S., Schroeder M., Shogren T., Shroff N., Winant A., Yelton M.A., Botstein D., Davis R.W., Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Du Z., Favello A., Fulton L., Gattung S., Greco T., Hallsworth K., Hawkins J., Hillier L.W., Jier M., Johnson D., Johnston L., Kirsten J., Kucaba T., Langston Y., Latreille P., Le T., Mardis E., Menezes S., Miller N., Nhan M., Pauley A., Peluso D., Rifkin L., Riles L., Taich A., Trevaskis E., Vignati D., Wilcox L., Wohldman P., Vaudin M., Wilson R., Waterston R., Albermann K., Hani J., Heumann K., Kleine K., Mewes H.-W., Zollner A., Zaccaria P.
Nature 387:75-78(1997) [PubMed: 9169867] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]"Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae."
Lussier M., White A.-M., Sheraton J., di Paolo T., Treadwell J., Southard S.B., Horenstein C.I., Chen-Weiner J., Ram A.F.J., Kapteyn J.C., Roemer T.W., Vo D.H., Bondoc D.C., Hall J., Zhong W.-W., Sdicu A.-M., Davies J., Klis F.M., Robbins P.W., Bussey H.
Genetics 147:435-450(1997) [PubMed: 9335584] [Abstract]
Cited for: IDENTIFICATION.
[3]"Interaction trap experiment with CDC6."
Zavec P.B., Comino A., Watt P., Komel R.
Pflugers Arch. 439:R94-R96(2000) [PubMed: 10653153] [Abstract]
Cited for: INTERACTION WITH CDC6.
[4]"Ecm11 is located in the cell nucleus throughout mitosis."
Comino A., Mancek M., Komel R.
Pflugers Arch. 442:R179-R181(2001) [PubMed: 11678331] [Abstract]
Cited for: SUBCELLULAR LOCATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

U33007 Genomic DNA. Translation: AAB64870.1.
PIRS69725.
RefSeqNP_010734.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

DIPDIP:2060N.
IntActQ04110. 4 interactions.

Genome annotation databases

EnsemblYDR446W. Saccharomyces cerevisiae. [Contig view]
GeneID852057.
GenomeReviewsGene locus YDR446W in contig Z71256_GR.
KEGGsce:YDR446W.
NMPDRfig|4932.3.peg.1507.

Organism-specific databases

CYGDYDR446w.
SGDS000002854. ECM11.
Yeast-GFPSearch...

Phylogenomic databases

HOGENOMQ04110.
OMAQ04110. RGLANES.

Gene expression databases

ArrayExpressQ04110.
GermOnlineYDR446W. Saccharomyces cerevisiae.

Family and domain databases

ProtoNetSearch...

Other Resources

NextBio970325.

Entry information

Entry nameECM11_YEAST
AccessionPrimary (citable) accession number: Q04110
Entry history
Integrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: November 1, 1996
Last modified: June 16, 2009
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents