Q03T57 (Q03T57_LACBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease M5 EMBL ABJ63615.1
EC=3.1.26.8 EMBL ABJ63615.1

Gene names

Ordered Locus Names:

LVIS_0457

Organism

Lactobacillus brevis (strain ATCC 367 / JCM 1170) [Complete proteome] [HAMAP]

Taxonomic identifier

387344 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	190 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABJ63615.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ribonuclease M5 activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03T57 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 5A0BE17EFD621DF8	FASTA	190	20,526
	10 20 30 40 50 60 MKKIKEVLVV EGKDDTKQIN RAVNADTIET RGSAIDDDTL TLIQKLADQR GVIIFTDPDF 70 80 90 100 110 120 SGEKIRKIVA EAVPNAKHAF LPKAAGRPEK AGGSLGVEHA SPDAIRAALD HVYTETTAAP 130 140 150 160 170 180 TLITHDDLLA AGLIGGAGAK ARREQLGEIL QIGYVNGKQL EKRLRMFGIQ PADFAAALQQ 190 VREKEQSHDK

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000416 Genomic DNA. Translation: ABJ63615.1.
RefSeq	YP_794646.1. NC_008497.1.
3D structure databases
ProteinModelPortal	Q03T57.
ModBase	Search...
Protein-protein interaction databases
STRING	Q03T57.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4413311.
GenomeReviews	Gene locus LVIS_0457 in contig CP000416_GR.
KEGG	lbr:LVIS_0457.
NMPDR	fig|387344.8.peg.442.
PATRIC	22199880. VBILacBre134470_0448.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1658.
HOGENOM	HBG304082.
OMA	DTIETRG.
ProtClustDB	CLSK821185.
Family and domain databases
InterPro	IPR004466. PrimaseG-like. IPR006171. Toprim_domain. [Graphical view]
KO	K05985.
Pfam	PF01751. Toprim. 1 hit. [Graphical view]
SMART	SM00493. TOPRIM. 1 hit. [Graphical view]
TIGRFAMs	TIGR00334. 5S_RNA_mat_M5. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q03T57_LACBA

Accession

Primary (citable) accession number: Q03T57

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)