Q03Q07 (Q03Q07_LACBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component EMBL ABJ64715.1

Gene names

Ordered Locus Names:

LVIS_1639 EMBL ABJ64715.1

Organism

Lactobacillus brevis (strain ATCC 367 / JCM 1170) [Complete proteome] [HAMAP] EMBL ABJ64715.1

Taxonomic identifier

387344 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus › Lactobacillus brevis

Protein attributes

Sequence length	579 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000684 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ATP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATPase activity, coupled to transmembrane movement of substances Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03Q07 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 98B8F34AD2897F53	FASTA	579	65,688
	10 20 30 40 50 60 MKGFLTTFKH DHWVMPYLRR YRKLLVLVLF LGFMTFFCGG ALMFNSGYLI SRAATHPYNI 70 80 90 100 110 120 LMIYVPIVLA RAFGIGRPAF RYAERLTSHN WVLRIVSDFR KRLYQAVEKQ AVAIRQTHQT 130 140 150 160 170 180 GDVLSILADD IDHIENLYLR TVFPLVIGWL LYLFVVVGIG YFNWAFGLLM LILLGVIVIV 190 200 210 220 230 240 MPLVSVAANG RREFQARQVQ RQFYTQLTDA VLGLGDWLIS GRRQAFLQQQ EQPIDRIATL 250 260 270 280 290 300 RRADHHFQWW RNFAIQFVFG AAVVLIVWWA GVTFTHNQAE ANWVAAFGLA LFPAVEPFAD 310 320 330 340 350 360 MSQGVSEWPV YQDSIRRVNS LDEVTPEQPV VQTTIGPLTD LTLDHVRFTY SGAKREVLSD 370 380 390 400 410 420 LSLTLHPGEK LALLGPSGTG KSTLLKLILG DEQPNSGRVT LNGVSIDQLQ AQRAQLFGVL 430 440 450 460 470 480 DQQPYLFNTT VMNNVRLGNL QATDDDVRAA VKAVELDELI SRLPDGYNTQ VQEAGSRFSG 490 500 510 520 530 540 GERQRLSLAR ILLQDAPIII LDEPTVSLDP ITEQHLLDTV FKVLHDKTII WVTHHLAGIN 550 560 570 HVDQVRFIEH GQFDMQGSPQ DLYQNNARFR ALYDLDRGH

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K., Slesarev A., Wolf Y., Sorokin A., Mirkin B., Koonin E., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B., Mills D. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 367 / JCM 1170.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000416 Genomic DNA. Translation: ABJ64715.1.
RefSeq	YP_795746.1. NC_008497.1.
3D structure databases
ProteinModelPortal	Q03Q07.
ModBase	Search...
Protein-protein interaction databases
STRING	387344.LVIS_1639.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ64715; ABJ64715; LVIS_1639.
GeneID	4413711.
KEGG	lbr:LVIS_1639.
PATRIC	22202203. VBILacBre134470_1551.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4987.
KO	K16012.
OMA	PAITANE.
ProtClustDB	CLSK2757041.
Enzyme and pathway databases
BioCyc	LBRE387344:GJ8S-1639-MONOMER.
Family and domain databases
InterPro	IPR003593. AAA+_ATPase. IPR014223. ABC_CydC. IPR003439. ABC_transporter-like. IPR017871. ABC_transporter_CS. IPR017940. ABC_transporter_type1. IPR001140. ABC_transptr_TM_dom. IPR011527. ABC_transptrTM_dom_typ1. [Graphical view]
Pfam	PF00664. ABC_membrane. 1 hit. PF00005. ABC_tran. 1 hit. [Graphical view]
SMART	SM00382. AAA. 1 hit. [Graphical view]
SUPFAM	SSF90123. ABC_TM_1. 1 hit.
TIGRFAMs	TIGR02868. CydC. 1 hit.
PROSITE	PS50929. ABC_TM1F. 1 hit. PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q03Q07_LACBA

Accession

Primary (citable) accession number: Q03Q07

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	May 1, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)