Q03NF1 (Q03NF1_LACBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-L-arabinofuranosidase EMBL ABJ65271.1

Gene names

Ordered Locus Names:

LVIS_2221

Organism

Lactobacillus brevis (strain ATCC 367 / JCM 1170) [Complete proteome] [HAMAP]

Taxonomic identifier

387344 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	501 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-arabinose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-arabinofuranosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03NF1 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 1E7096BF7002897A	FASTA	501	56,904
	10 20 30 40 50 60 MQGSTKIQIQ DVVAPIDRRL YGAFIEQLGR AVYTGIYQPD HPTADSDGFR TDVIDAIKTL 70 80 90 100 110 120 NVPLIRYPGG NFLSQYRWED GIGPKSQRPV RLDLAWRELE TNQFGLHEFM RWADKVNAVP 130 140 150 160 170 180 NMAVNLGTRG IQAAADLIEY CNFPKGTYLS DLRRQNGAEH PFAIKTWCLG NEMDGPWEIG 190 200 210 220 230 240 AKSAGEYAHL ANETAKAMRR VDDTLELVAC GSSSMDNPTF GNWEETVLDA CYDNVDYLSL 250 260 270 280 290 300 HRYYGYYNDD DPTELDNFLG KNHDLDDFIK GVVAMCDAVK ARKRSTKTIN LSFDEWNVWY 310 320 330 340 350 360 HSNDADTQVT PWQVGPHLLE DIYNFEDALL IGSLLMTLLR NADRVKIACL AQLVNVIAPI 370 380 390 400 410 420 MTDENGGVWR QSIFYPFMQV ANYGQGVVLT DHSTSPTYNS REFTDVAYLD TVTTYDAATQ 430 440 450 460 470 480 TVTVFAENKH QTETLDFELN FGELMIDRLL DATQFYGYDV KADNRDGHMQ LQPLPARTDT 490 500 HHAHTKLQPL SWNVLRFKLR D

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000416 Genomic DNA. Translation: ABJ65271.1.
RefSeq	YP_796302.1. NC_008497.1.
3D structure databases
ProteinModelPortal	Q03NF1.
SMR	Q03NF1. Positions 5-498.
ModBase	Search...
Protein-protein interaction databases
STRING	Q03NF1.
Protein family/group databases
CAZy	GH51. Glycoside Hydrolase Family 51.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4413414.
GenomeReviews	Gene locus LVIS_2221 in contig CP000416_GR.
KEGG	lbr:LVIS_2221.
NMPDR	fig|387344.8.peg.2089.
PATRIC	22203378. VBILacBre134470_2126.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3534.
HOGENOM	HBG654651.
OMA	NELDGPW.
ProtClustDB	CLSK778199.
Family and domain databases
InterPro	IPR010720. Alpha-L-AF_C. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01209.
Pfam	PF06964. Alpha-L-AF_C. 1 hit. [Graphical view]
SMART	SM00813. Alpha-L-AF_C. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q03NF1_LACBA

Accession

Primary (citable) accession number: Q03NF1

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)