Q03N89 (Q03N89_LACBA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-xylosidase EMBL ABJ65333.1

Gene names

Ordered Locus Names:

LVIS_2285

Organism

Lactobacillus brevis (strain ATCC 367 / JCM 1170) [Complete proteome] [HAMAP]

Taxonomic identifier

387344 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	540 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03N89 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 01929F03211575C3	FASTA	540	61,445
	10 20 30 40 50 60 MKIQNPVLPG FNADPSMIRV GDTYYIANST FEWFPGVRLH ESKDLVHWNL LPSPLSTTTL 70 80 90 100 110 120 LDMKGNPASG GIWAPDLSYA DGKFWLIYTD VKITEGPFKD MTNYLTTATD IRGPWTDPIA 130 140 150 160 170 180 VNGVGFDASL FHDENGRKYL VQQTWDHREY HHPFNGITLT EFDTATMQLK PETARNIYNG 190 200 210 220 230 240 TDVKLVEGPH LYQINGYYYL FAAEGGTVFT HQEVVARSKT LDELSFESEP DGPFITNMDT 250 260 270 280 290 300 PDFYLQKQGH GALTSTPSGE WYYASLVSRP WNHTNESSHD PRGWSTLGRE TSIQKVEWDD 310 320 330 340 350 360 AGWPRVVGGH GGQVEVDAPK DAIETTAPKD HSQHDDFDQP TLDLNWNTLR QPFTAQMGSV 370 380 390 400 410 420 GNGELKLIGQ QTMSSNFDVS LIARRWQAFN FDAETKVKFD PFTYQQMAGL ANIYNDKHYS 430 440 450 460 470 480 WIFITWDEKK GHVIEVAQND NNNYTSYLKD DAIKIPDGTD YVWFRTKVRK QSYTYEYSFD 490 500 510 520 530 540 GQNWETVPVE LDAAILSDDY VLQNYGGFFT GAFVGLMAAD YAGYKRVATF DYFDYQELPD

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000416 Genomic DNA. Translation: ABJ65333.1.
RefSeq	YP_796364.1. NC_008497.1.
3D structure databases
ProteinModelPortal	Q03N89.
SMR	Q03N89. Positions 2-537.
ModBase	Search...
Protein-protein interaction databases
STRING	Q03N89.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4413889.
GenomeReviews	Gene locus LVIS_2285 in contig CP000416_GR.
KEGG	lbr:LVIS_2285.
NMPDR	fig|387344.8.peg.2152.
PATRIC	22203504. VBILacBre134470_2189.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3507.
HOGENOM	HBG347235.
OMA	LHESKDL.
ProtClustDB	CLSK876883.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit. G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KO	K01198.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit. SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q03N89_LACBA

Accession

Primary (citable) accession number: Q03N89

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)