Q03HF7 (Q03HF7_PEDPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNAse M5 EMBL ABJ67365.1
EC=3.1.26.8 EMBL ABJ67365.1

Gene names

Ordered Locus Names:

PEPE_0268

Organism

Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) [Complete proteome] [HAMAP] EMBL ABJ67365.1

Taxonomic identifier

278197 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Pediococcus

Protein attributes

Sequence length	186 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABJ67365.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ribonuclease M5 activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03HF7 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 3567C20114AD890E	FASTA	186	20,603
	10 20 30 40 50 60 MKKIKEVIVV EGKDDTKRIN LAVNADTLET RGSALSDETI EQIRQLQESR GVIVFTDPDF 70 80 90 100 110 120 SGEKIRKTIS AEVPNVKHAF LKRKDAVPDH KGSLGVEHAT PEVIRQSLEH LYTEDEDAAP 130 140 150 160 170 180 QITQSDLIDA GLIAGSAAKQ RRIRLGDLLG IGYVNAKQLP KRLQLFQVEK SDFNHAVEQI NGGINE

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000422 Genomic DNA. Translation: ABJ67365.1.
RefSeq	YP_803807.1. NC_008525.1.
3D structure databases
ProteinModelPortal	Q03HF7.
ModBase	Search...
Protein-protein interaction databases
STRING	Q03HF7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4418545.
GenomeReviews	Gene locus PEPE_0268 in contig CP000422_GR.
KEGG	ppe:PEPE_0268.
NMPDR	fig|278197.10.peg.244.
PATRIC	22873892. VBIPedPen34213_0259.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1658.
HOGENOM	HBG304082.
OMA	DTIETRG.
ProtClustDB	CLSK845698.
Enzyme and pathway databases
BioCyc	PPEN278197:PEPE_0268-MONOMER.
Family and domain databases
InterPro	IPR004466. PrimaseG-like. IPR006171. Toprim_domain. [Graphical view]
KO	K05985.
Pfam	PF01751. Toprim. 1 hit. [Graphical view]
SMART	SM00493. TOPRIM. 1 hit. [Graphical view]
TIGRFAMs	TIGR00334. 5S_RNA_mat_M5. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q03HF7_PEDPA

Accession

Primary (citable) accession number: Q03HF7

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)