Q03EG2 (Q03EG2_PEDPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA helicase PcrA EMBL ABJ68410.1
EC=3.6.1.- EMBL ABJ68410.1

Gene names

Ordered Locus Names:

PEPE_1372

Organism

Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) [Complete proteome] [HAMAP] EMBL ABJ68410.1

Taxonomic identifier

278197 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Pediococcus › Pediococcus pentosaceus

Protein attributes

Sequence length	757 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

ATP + H2O = ADP + phosphate. SAAS SAAS000212

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase SAAS SAAS000212 EMBL ABJ68410.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA unwinding involved in replication Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent DNA helicase activity Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03EG2 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 43F716CEE180B3B4	FASTA	757	85,870
	10 20 30 40 50 60 MPEINLIKGL NDMQKEAVQT TEGPLLIMAG AGSGKTRVLT HRVAYLIEEK GVNPWNVLAI 70 80 90 100 110 120 TFTNKAAREM RERVTSLLGD EAAEIWVSTF HALCVRILRR NIDQLGYNRA FSIADPSEQR 130 140 150 160 170 180 TLVKHILADL NYDPKKFDPR SVLGTISNAK NDLKTPLTYR ENASTPYEQV VADIYEEYQR 190 200 210 220 230 240 RLENNQALDF DDLIMKTIEL FQKNPETLSF YQNKFHYIHV DEYQDTNQAQ YQLVTMLAKH 250 260 270 280 290 300 FRNICVVGDS DQSIYGWRGA DMQNIMNFES DYPDSKTVML EQNYRSTQNI LNAANDVIEN 310 320 330 340 350 360 NVERKPKQLW TDNDEGEKIS YYRGQTGIDE AHFIVQKIRE QIKEHNLNYG DFAILYRTNA 370 380 390 400 410 420 QSRVIEDTFV KSNIPYLMVG GHKFYDRKEI RDVLSYLTLI ANEDDSMSFE RVINEPKRGI 430 440 450 460 470 480 GSTSIAKLQA FADENNWSLL KAARSVQIAN GISSRARNAI EDFAKMIDAL RKSGEFLNIT 490 500 510 520 530 540 ELTEAVLEQT GYRAALEKSR TMESEARLEN IDEFLTVTKQ FDDKNEAEGN EIADENGDNI 550 560 570 580 590 600 QLVDFLADLA LVSDQDNVEE EPSGVTLMTL HAAKGLEFPI VFLVGMEDGI FPLSRAMMDQ 610 620 630 640 650 660 EQLEEERRLA YVGITRARQK LYITNAYSRM LYGRTQTNPA SRFISEIGSQ YLKSENEEKS 670 680 690 700 710 720 FSRNTKEKSY PFDNNRNARA TASVYGNTHA TAVKSNGSGA GKVSWNAGDK VEHKAWGIGT 730 740 750 VVKVSGAGED AELDIAFKDQ GIKRLLAAFA PIKRVVE

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K., Slesarev A., Wolf Y., Sorokin A., Mirkin B., Koonin E., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B., Mills D. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25745 / 183-1w.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000422 Genomic DNA. Translation: ABJ68410.1.
RefSeq	YP_804852.1. NC_008525.1.
3D structure databases
ProteinModelPortal	Q03EG2.
SMR	Q03EG2. Positions 5-653.
ModBase	Search...
Protein-protein interaction databases
STRING	278197.PEPE_1372.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABJ68410; ABJ68410; PEPE_1372.
GeneID	4416987.
KEGG	ppe:PEPE_1372.
PATRIC	22876056. VBIPedPen34213_1296.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0210.
HOGENOM	HOG000033016.
KO	K03657.
OMA	GVSAKIT.
ProtClustDB	CLSK821261.
Enzyme and pathway databases
BioCyc	PPEN278197:GI4Y-1389-MONOMER.
Family and domain databases
Gene3D	1.10.10.160. 1 hit.
InterPro	IPR005751. ATP-dep_DNA_helicase_PcrA. IPR013986. DExx_box_DNA_helicase_dom. IPR014017. DNA_helicase_UvrD-like_C. IPR000212. DNA_helicase_UvrD/REP. IPR014016. UvrD-like_ATP-bd. [Graphical view]
PANTHER	PTHR11070. PTHR11070. 1 hit.
Pfam	PF00580. UvrD-helicase. 1 hit. PF13361. UvrD_C. 1 hit. [Graphical view]
TIGRFAMs	TIGR01073. pcrA. 1 hit.
PROSITE	PS51198. UVRD_HELICASE_ATP_BIND. 1 hit. PS51217. UVRD_HELICASE_CTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q03EG2_PEDPA

Accession

Primary (citable) accession number: Q03EG2

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)