Q03DT4 (Q03DT4_PEDPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Malolactic enzyme EMBL ABJ68638.1

Gene names

Ordered Locus Names:

PEPE_1617

Organism

Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) [Complete proteome] [HAMAP] EMBL ABJ68638.1

Taxonomic identifier

278197 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Pediococcus

Protein attributes

Sequence length	542 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the malic enzymes family. RuleBase RU003427

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU003427
Molecular function	Oxidoreductase RuleBase RU003427
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	malate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro malate dehydrogenase (oxaloacetate-decarboxylating) activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q03DT4 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: CCC0E5EB0767EC99	FASTA	542	59,954
	10 20 30 40 50 60 MTEKAMSILN NPYLNKGTAF TKEERDQLGL NGLIPPYIQT IDEQVEQVYA QFQTKANDLE 70 80 90 100 110 120 KRLFLMQIFN ENRVLFYKLF SQHVVEFMPI VYDPTIADTI ENYSELYVQS QNATFLSIDD 130 140 150 160 170 180 PDMMEEALKN SAAGRDIRLI VVTDAEGILG IGDWGTNGVD ISVGKLMVYT AAAGIDPSQV 190 200 210 220 230 240 LPVVLDVGTN NQDLLKNPMY LGNRHERIKG DRYYDFVDKF VETAENLFPN MYLHFEDFGR 250 260 270 280 290 300 DNAANILNKY KDRYVIFNDD IQGTGIITLA GILGALNISK QKITDQVYLS FGAGTAGAGI 310 320 330 340 350 360 LGRIYEEMIE NGLSEEEAKK HFYMVDKQGL LFDDDETLTP EQKPFARKRS EFDNADELTD 370 380 390 400 410 420 LLSVVKAVHP TIMVGTSTQP GSFTEEVVRE MAAHTERPII FPLSNPTKLA EAKAEDLLKW 430 440 450 460 470 480 TDGRALIATG IPVGDIEYNG VTYQIGQANN ALVYPGLGLG VIASTAKVLN DTMISKAAHS 490 500 510 520 530 540 LGGIVDVDQP GAAVLPPVSK LSDFSNTVAK AIAQSAVDQG LTKEKIDNVD QAVEDTRWNP EY

References

[1]

"Comparative genomics of the lactic acid bacteria." Makarova K.S., Slesarev A., Wolf Y.I., Sorokin A., Mirkin B., Koonin E.V., Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V., Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M., Hawkins T. , Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A., Baldwin K., Lee J.-H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W., Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y., Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J.R., Hutkins R., O'Sullivan D., Steele J., Unlu G., Saier M.H. Jr., Klaenhammer T., Richardson P., Kozyavkin S., Weimer B.C., Mills D.A. Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006) [PubMed: 17030793] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000422 Genomic DNA. Translation: ABJ68638.1.
RefSeq	YP_805080.1. NC_008525.1.
3D structure databases
ProteinModelPortal	Q03DT4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q03DT4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4417894.
GenomeReviews	Gene locus PEPE_1617 in contig CP000422_GR.
KEGG	ppe:PEPE_1617.
NMPDR	fig|278197.10.peg.1423.
PATRIC	22876542. VBIPedPen34213_1523.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0281.
HOGENOM	HBG289821.
OMA	NNALIFP.
PhylomeDB	Q03DT4.
ProtClustDB	PRK13529.
Enzyme and pathway databases
BioCyc	PPEN278197:PEPE_1617-MONOMER.
Family and domain databases
InterPro	IPR015884. Malic_enzyme_CS. IPR012301. Malic_N. IPR012302. Malic_NAD-bd. IPR001891. Malic_OxRdtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.10380. G3DSA:3.40.50.10380. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00027.
Pfam	PF00390. malic. 1 hit. PF03949. Malic_M. 1 hit. [Graphical view]
PIRSF	PIRSF000106. ME. 1 hit.
PRINTS	PR00072. MALOXRDTASE.
SMART	SM00919. Malic_M. 1 hit. [Graphical view]
PROSITE	PS00331. MALIC_ENZYMES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q03DT4_PEDPA

Accession

Primary (citable) accession number: Q03DT4

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)