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Protein
Submitted name:

Glycerol uptake facilitator related permease (Major Intrinsic Protein Family)

Gene

LSEI_0660

Organism
Lactobacillus casei (strain ATCC 334)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator related permease (Major Intrinsic Protein Family)Imported
Gene namesi
Ordered Locus Names:LSEI_0660Imported
OrganismiLactobacillus casei (strain ATCC 334)Imported
Taxonomic identifieri321967 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000001651 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 26HelicalSequence analysisAdd BLAST21
Transmembranei38 – 60HelicalSequence analysisAdd BLAST23
Transmembranei80 – 103HelicalSequence analysisAdd BLAST24
Transmembranei135 – 153HelicalSequence analysisAdd BLAST19
Transmembranei165 – 185HelicalSequence analysisAdd BLAST21
Transmembranei214 – 234HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ03BC1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q03BC1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWTQTLGEFI GTLILILLGD GVVAGVSLNQ SKAKDAGWVA ITLGWGLAVT
60 70 80 90 100
MGVYTAAFLG PAHLNPAVTI AFAAIGQFSW SWVLPFVAAQ MLGAFLGAAI
110 120 130 140 150
VWLHYYPHWA KTNDQATTLG VFATGPAIRN YTANFLSEFI GTAVLIFGLL
160 170 180 190 200
AFAQGKWTAG LAPTGVGILI TAIGLSLGGT TGYAINPARD LGPRLAHAIL
210 220 230
PIAHKGGSDW GYSWVPVLGP LAGGVVGALI FVTLP
Length:235
Mass (Da):24,357
Last modified:November 14, 2006 - v1
Checksum:i8B78E425FD2C0045
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000423 Genomic DNA. Translation: ABJ69501.1.
RefSeqiWP_011674226.1. NC_008526.1.
YP_805943.1. NC_008526.1.

Genome annotation databases

EnsemblBacteriaiABJ69501; ABJ69501; LSEI_0660.
GeneIDi4419247.
KEGGilca:LSEI_0660.
PATRICi22205006. VBILacCas62221_0663.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000423 Genomic DNA. Translation: ABJ69501.1.
RefSeqiWP_011674226.1. NC_008526.1.
YP_805943.1. NC_008526.1.

3D structure databases

ProteinModelPortaliQ03BC1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABJ69501; ABJ69501; LSEI_0660.
GeneIDi4419247.
KEGGilca:LSEI_0660.
PATRICi22205006. VBILacCas62221_0663.

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ03BC1_LACC3
AccessioniPrimary (citable) accession number: Q03BC1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 2, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.