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Protein
Submitted name:

(kidney bean) leghemoglobin

Gene

PHAVU_007G141900g

Organism
Phaseolus vulgaris (Kidney bean) (French bean)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

HemeUniRule annotationSAAS annotation, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Submitted name:
(kidney bean) leghemoglobinImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:PHAVU_007G141900gImported, PHAVU_007G142500gImported, PHAVU_007G142600gImported
OrganismiPhaseolus vulgaris (Kidney bean) (French bean)Imported
Taxonomic identifieri3885 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaePhaseoleaePhaseolus
Proteomesi
  • UP000000226 Componenti: Chromosome 7

PTM / Processingi

Proteomic databases

ProMEXiQ03972.

Structurei

3D structure databases

ProteinModelPortaliQ03972.
SMRiQ03972. Positions 3-144.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 145144GLOBINInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the plant globin family.UniRule annotation

Phylogenomic databases

PhylomeDBiQ03972.

Family and domain databases

Gene3Di1.10.490.10. 1 hit.
InterProiIPR000971. Globin.
IPR009050. Globin-like.
IPR012292. Globin/Proto.
IPR001032. Leghaemoglobin.
IPR019824. Leghaemoglobin_Fe_BS.
[Graphical view]
PfamiPF00042. Globin. 1 hit.
[Graphical view]
PRINTSiPR00188. PLANTGLOBIN.
SUPFAMiSSF46458. SSF46458. 1 hit.
PROSITEiPS01033. GLOBIN. 1 hit.
PS00208. PLANT_GLOBIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q03972-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAFTEKQEA LVNSSWEAFK GNIPQYSVVF YTSILEKAPA AKNLFSFLAN
60 70 80 90 100
GVDPTNPKLT AHAESLFGLV RDSAAQLRAN GAVVADAALG SIHSQKGVND
110 120 130 140
SQFLVVKEAL LKTLKEAVGD KWTDELSTAL ELAYDELAAA IKKAYA
Length:146
Mass (Da):15,620
Last modified:November 1, 1996 - v1
Checksum:i1C24380108088D9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K03152 Genomic DNA. Translation: AAA33767.1.
CM002294 Genomic DNA. Translation: ESW16259.1.
CM002294 Genomic DNA. Translation: ESW16267.1.
CM002294 Genomic DNA. Translation: ESW16268.1.
RefSeqiXP_007144265.1. XM_007144203.1.
XP_007144273.1. XM_007144211.1.
XP_007144274.1. XM_007144212.1.

Genome annotation databases

GeneIDi18625865.
18625872.
18625873.
KEGGipvu:PHAVU_007G141900g.
pvu:PHAVU_007G142500g.
pvu:PHAVU_007G142600g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K03152 Genomic DNA. Translation: AAA33767.1.
CM002294 Genomic DNA. Translation: ESW16259.1.
CM002294 Genomic DNA. Translation: ESW16267.1.
CM002294 Genomic DNA. Translation: ESW16268.1.
RefSeqiXP_007144265.1. XM_007144203.1.
XP_007144273.1. XM_007144211.1.
XP_007144274.1. XM_007144212.1.

3D structure databases

ProteinModelPortaliQ03972.
SMRiQ03972. Positions 3-144.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

ProMEXiQ03972.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi18625865.
18625872.
18625873.
KEGGipvu:PHAVU_007G141900g.
pvu:PHAVU_007G142500g.
pvu:PHAVU_007G142600g.

Phylogenomic databases

PhylomeDBiQ03972.

Family and domain databases

Gene3Di1.10.490.10. 1 hit.
InterProiIPR000971. Globin.
IPR009050. Globin-like.
IPR012292. Globin/Proto.
IPR001032. Leghaemoglobin.
IPR019824. Leghaemoglobin_Fe_BS.
[Graphical view]
PfamiPF00042. Globin. 1 hit.
[Graphical view]
PRINTSiPR00188. PLANTGLOBIN.
SUPFAMiSSF46458. SSF46458. 1 hit.
PROSITEiPS01033. GLOBIN. 1 hit.
PS00208. PLANT_GLOBIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Structure and chromosomal arrangement of leghemoglobin genes in kidney bean suggest divergence in soybean leghemoglobin gene loci following tetraploidization."
    Lee J.S., Verma D.P.
    EMBO J. 3:2745-2752(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Schmutz J., McClean P., Shu S., Cregan P., Rokhsar D., Jackson S.
    Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ03972_PHAVU
AccessioniPrimary (citable) accession number: Q03972
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 13, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.