Q03759 (YMK8_YEAST) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 71.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Uncharacterized protein YML108W | ||||
| Gene names |
| ||||
| Organism | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | ||||
| Taxonomic identifier | 559292 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 105 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Miscellaneous | Present with 2610 molecules/cell in log phase SD medium. Ref.3 |
Ontologies
| Keywords | |
|---|---|
| Technical term | 3D-structure Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from direct assay. Source: SGD nucleusInferred from direct assay. Source: SGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 105 | 105 | Uncharacterized protein YML108W | PRO_0000203242 | ||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||
| Beta strand | 7 – 13 | 7 | ||||||||||||||||||||||||
| Turn | 21 – 23 | 3 | ||||||||||||||||||||||||
| Beta strand | 25 – 27 | 3 | ||||||||||||||||||||||||
| Beta strand | 37 – 43 | 7 | ||||||||||||||||||||||||
| Helix | 50 – 65 | 16 | ||||||||||||||||||||||||
| Beta strand | 72 – 77 | 6 | ||||||||||||||||||||||||
| Turn | 78 – 80 | 3 | ||||||||||||||||||||||||
| Beta strand | 81 – 86 | 6 | ||||||||||||||||||||||||
| Helix | 88 – 90 | 3 | ||||||||||||||||||||||||
| Helix | 91 – 104 | 14 | ||||||||||||||||||||||||
Sequences
References
| « Hide 'large scale' references | |
| [1] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII." Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P. Barrell B.G.Nature 387:90-93(1997) [PubMed: 9169872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972. |
| [2] | Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c. |
| [3] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | Z49210 Genomic DNA. Translation: CAA89110.1. BK006946 Genomic DNA. Translation: DAA09790.1. | ||||||||||||
| PIR | S53964. | ||||||||||||
| RefSeq | NP_013599.1. NM_001182470.1. | ||||||||||||
3D structure databases | |||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||
| ProteinModelPortal | Q03759. | ||||||||||||
| SMR | Q03759. Positions 1-105. | ||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| DIP | DIP-3849N. | ||||||||||||
| IntAct | Q03759. 3 interactions. | ||||||||||||
| MINT | MINT-555107. | ||||||||||||
| STRING | Q03759. | ||||||||||||
Protocols and materials databases | |||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||
Genome annotation databases | |||||||||||||
| EnsemblFungi | YML108W; YML108W; YML108W. | ||||||||||||
| GeneID | 854863. | ||||||||||||
| KEGG | sce:YML108W. | ||||||||||||
| NMPDR | fig|4932.3.peg.4635. | ||||||||||||
Organism-specific databases | |||||||||||||
| CYGD | YML108w. | ||||||||||||
| SGD | S000004576. YML108W. | ||||||||||||
Phylogenomic databases | |||||||||||||
| eggNOG | fuNOG10925. | ||||||||||||
| HOGENOM | HBG203432. | ||||||||||||
| OMA | CIPNEGH. | ||||||||||||
| OrthoDB | EOG46QB39. | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q03759. | ||||||||||||
| Genevestigator | Q03759. | ||||||||||||
| GermOnline | YML108W. Saccharomyces cerevisiae. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR015080. DUF1892. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:3.10.20.250. DUF1892. 1 hit. | ||||||||||||
| Pfam | PF08987. DUF1892. 1 hit. [Graphical view] | ||||||||||||
| SUPFAM | SSF89975. DUF1892. 1 hit. | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other | |||||||||||||
| NextBio | 977783. | ||||||||||||
Entry information
| Entry name | YMK8_YEAST | ||||||||
| Accession | Primary (citable) accession number: Q03759 Secondary accession number(s): D6W0H6 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Fungal Protein Annotation Program | ||||||||
Relevant documents
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome XIII Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |

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