Reviewed,
UniProtKB/Swiss-Prot Q03759 (YMK8_YEAST)
Last modified
November 24, 2009.
Version 56.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Uncharacterized protein YML108W | ||||
| Gene names |
| ||||
| Organism | Saccharomyces cerevisiae (Baker's yeast) [Complete proteome] | ||||
| Taxonomic identifier | 4932 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces |
Protein attributes
| Sequence length | 105 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Miscellaneous | Present with 2610 molecules/cell in log phase SD medium. Ref.2 |
Ontologies
| Keywords | |
|---|---|
| Technical term | 3D-structure Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from direct assay. Source: SGD nucleusInferred from direct assay. Source: SGD |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 105 | 105 | Uncharacterized protein YML108W | PRO_0000203242 | ||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||
| Beta strand | 7 – 13 | 7 | ||||||||||||||||||||||||
| Turn | 21 – 23 | 3 | ||||||||||||||||||||||||
| Beta strand | 25 – 27 | 3 | ||||||||||||||||||||||||
| Beta strand | 37 – 43 | 7 | ||||||||||||||||||||||||
| Helix | 50 – 65 | 16 | ||||||||||||||||||||||||
| Beta strand | 72 – 77 | 6 | ||||||||||||||||||||||||
| Turn | 78 – 80 | 3 | ||||||||||||||||||||||||
| Beta strand | 81 – 86 | 6 | ||||||||||||||||||||||||
| Helix | 88 – 90 | 3 | ||||||||||||||||||||||||
| Helix | 91 – 104 | 14 | ||||||||||||||||||||||||
Sequences
References
| [1] | "The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII." Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P. Barrell B.G.Nature 387:90-93(1997) [PubMed: 9169872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972. |
| [2] | "Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Z49210 Genomic DNA. Translation: CAA89110.1. | |||||||||||||
| PIR | S53964. | ||||||||||||
| RefSeq | NP_013599.1. | ||||||||||||
3D structure databases | |||||||||||||
| |||||||||||||
| ModBase | Search... | ||||||||||||
Protein-protein interaction databases | |||||||||||||
| DIP | DIP:3849N. | ||||||||||||
| IntAct | Q03759. 6 interactions. | ||||||||||||
| STRING | Q03759. | ||||||||||||
Genome annotation databases | |||||||||||||
| Ensembl | YML108W; YML108W; YML108W; Saccharomyces cerevisiae. [Genome view] | ||||||||||||
| GeneID | 854863. | ||||||||||||
| KEGG | sce:YML108W. | ||||||||||||
| NMPDR | fig|4932.3.peg.4635. | ||||||||||||
Organism-specific databases | |||||||||||||
| CYGD | YML108w. | ||||||||||||
| SGD | S000004576. YML108W. | ||||||||||||
Phylogenomic databases | |||||||||||||
| HOGENOM | Q03759. | ||||||||||||
| OMA | CIPNEGH | ||||||||||||
| OrthoDB | EOG9X0P96 | ||||||||||||
Gene expression databases | |||||||||||||
| ArrayExpress | Q03759. | ||||||||||||
| Genevestigator | Q03759. | ||||||||||||
| GermOnline | YML108W. Saccharomyces cerevisiae. | ||||||||||||
Family and domain databases | |||||||||||||
| InterPro | IPR015080. DUF1892. [Graphical view] | ||||||||||||
| Gene3D | G3DSA:3.10.20.250. DUF1892. 1 hit. | ||||||||||||
| Pfam | PF08987. DUF1892. 1 hit. [Graphical view] | ||||||||||||
| ProtoNet | Search... | ||||||||||||
Other Resources | |||||||||||||
| NextBio | 977783. | ||||||||||||
Entry information
| Entry name | YMK8_YEAST | ||||||||
| Accession | Primary (citable) accession number: Q03759 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| Yeast Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD |
| Yeast chromosome XIII Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names |

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