Q03759 (YMK8_YEAST) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein YML108W

Gene names

Ordered Locus Names:	YML108W
ORF Names:	YM8339.11

Organism

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Taxonomic identifier

559292 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

Protein attributes

Sequence length	105 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Miscellaneous

Present with 2610 molecules/cell in log phase SD medium. Ref.3

Ontologies

Keywords
Technical term	3D-structure Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	cytoplasm Inferred from direct assay. Source: SGD nucleus Inferred from direct assay. Source: SGD
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 105

105

Uncharacterized protein YML108W

PRO_0000203242

Secondary structure

1

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105

Helix Strand Turn

Details...

Beta strand

7 – 13

7

Turn

21 – 23

3

Beta strand

25 – 27

3

Beta strand

37 – 43

7

Helix

50 – 65

16

Beta strand

72 – 77

6

Turn

78 – 80

3

Beta strand

81 – 86

6

Helix

88 – 90

3

Helix

91 – 104

14

Sequences

	Sequence		Length	Mass (Da)
	Q03759 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: 8D07986085C369C4	FASTA	105	12,339
	10 20 30 40 50 60 MSKSNTYRML VLLEDDTKIN KEDEKFLKGK PGKMHEFVDE LILPFNVDEL DELNTWFDKF 70 80 90 100 DAEICIPNEG HIKYEISSDG LIVLMLDKEI EEVVEKVKKF VEENN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII." Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P. , Skelton J., Walsh S.V., Whitehead S., Barrell B.G. Nature 387:90-93(1997) [PubMed: 9169872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 204511 / S288c / AB972.
[2]	Saccharomyces Genome Database Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: ATCC 204508 / S288c.
[3]	"Global analysis of protein expression in yeast." Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S. Nature 425:737-741(2003) [PubMed: 14562106] [Abstract] Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

Z49210 Genomic DNA. Translation: CAA89110.1.
BK006946 Genomic DNA. Translation: DAA09790.1.

PIR

S53964.

RefSeq

NP_013599.1. NM_001182470.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1N6Z	NMR	-	A	1-105	[»]

ProteinModelPortal

Q03759.

SMR

Q03759. Positions 1-105.

ModBase

Search...

Protein-protein interaction databases

DIP

DIP-3849N.

IntAct

Q03759. 3 interactions.

MINT

MINT-555107.

STRING

Q03759.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblFungi

YML108W; YML108W; YML108W.

GeneID

854863.

KEGG

sce:YML108W.

NMPDR

fig|4932.3.peg.4635.

Organism-specific databases

CYGD

YML108w.

SGD

S000004576. YML108W.

Phylogenomic databases

eggNOG

fuNOG10925.

HOGENOM

HBG203432.

OMA

CIPNEGH.

OrthoDB

EOG46QB39.

Gene expression databases

ArrayExpress

Q03759.

Genevestigator

Q03759.

GermOnline

YML108W. Saccharomyces cerevisiae.

Family and domain databases

InterPro

IPR015080. DUF1892.
[Graphical view]

Gene3D

G3DSA:3.10.20.250. DUF1892. 1 hit.

Pfam

PF08987. DUF1892. 1 hit.
[Graphical view]

SUPFAM

SSF89975. DUF1892. 1 hit.

ProtoNet

Search...

Other

NextBio

977783.

Entry information

Entry name

YMK8_YEAST

Accession

Primary (citable) accession number: Q03759
Secondary accession number(s): D6W0H6

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	December 14, 2011
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Fungal Protein Annotation Program