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Protein

Uncharacterized protein YML079W

Gene

YML079W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-32670-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YML079W
Gene namesi
Ordered Locus Names:YML079W
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XIII

Organism-specific databases

EuPathDBiFungiDB:YML079W.
SGDiS000004544. YML079W.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 201201Uncharacterized protein YML079WPRO_0000203248Add
BLAST

Proteomic databases

MaxQBiQ03629.
PeptideAtlasiQ03629.

PTM databases

iPTMnetiQ03629.

Interactioni

Protein-protein interaction databases

BioGridi35062. 11 interactions.
DIPiDIP-4697N.
MINTiMINT-529880.

Structurei

Secondary structure

1
201
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi17 – 204Combined sources
Helixi28 – 3710Combined sources
Beta strandi45 – 539Combined sources
Beta strandi57 – 604Combined sources
Beta strandi74 – 785Combined sources
Beta strandi80 – 878Combined sources
Beta strandi92 – 1009Combined sources
Beta strandi102 – 1098Combined sources
Beta strandi111 – 1166Combined sources
Beta strandi122 – 1298Combined sources
Helixi131 – 1333Combined sources
Beta strandi136 – 1416Combined sources
Beta strandi146 – 1516Combined sources
Turni155 – 1595Combined sources
Beta strandi161 – 1699Combined sources
Helixi173 – 1753Combined sources
Beta strandi176 – 1783Combined sources
Helixi181 – 1899Combined sources
Helixi191 – 1966Combined sources
Helixi198 – 2003Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XE7X-ray1.75A/B/C1-201[»]
1XE8X-ray2.80A/B/C1-201[»]
ProteinModelPortaliQ03629.
SMRiQ03629. Positions 6-201.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ03629.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000217520.
InParanoidiQ03629.
KOiK09705.
OMAiASTTIHY.
OrthoDBiEOG7KDFNS.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR009327. Cupin_DUF985.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF06172. Cupin_5. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

Q03629-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSANVQEAAN AAIEPASFVK VPMPEPPSSL QQLINDWQLI KHREGGYFKE
60 70 80 90 100
TDRSPYTMEV EKPVNGGSGN TEMVTRNQST LIYYLLTPDS PIGKFHKNIN
110 120 130 140 150
RIIHILQRGK GQYVLVYPDG QVKSFKVGFD YKNGEVSQWV VPGGVFKASF
160 170 180 190 200
LLPNEEFDNG FLISEVVVPG FDFEDHTFLK GEDELKHLVG PEKAAELAFL

A
Length:201
Mass (Da):22,461
Last modified:November 1, 1997 - v1
Checksum:iDAC3A37EDB632987
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46373 Genomic DNA. Translation: CAA86499.1.
BK006946 Genomic DNA. Translation: DAA09818.1.
PIRiS48818.
RefSeqiNP_013632.1. NM_001182438.1.

Genome annotation databases

EnsemblFungiiYML079W; YML079W; YML079W.
GeneIDi854896.
KEGGisce:YML079W.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46373 Genomic DNA. Translation: CAA86499.1.
BK006946 Genomic DNA. Translation: DAA09818.1.
PIRiS48818.
RefSeqiNP_013632.1. NM_001182438.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1XE7X-ray1.75A/B/C1-201[»]
1XE8X-ray2.80A/B/C1-201[»]
ProteinModelPortaliQ03629.
SMRiQ03629. Positions 6-201.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi35062. 11 interactions.
DIPiDIP-4697N.
MINTiMINT-529880.

PTM databases

iPTMnetiQ03629.

Proteomic databases

MaxQBiQ03629.
PeptideAtlasiQ03629.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYML079W; YML079W; YML079W.
GeneIDi854896.
KEGGisce:YML079W.

Organism-specific databases

EuPathDBiFungiDB:YML079W.
SGDiS000004544. YML079W.

Phylogenomic databases

HOGENOMiHOG000217520.
InParanoidiQ03629.
KOiK09705.
OMAiASTTIHY.
OrthoDBiEOG7KDFNS.

Enzyme and pathway databases

BioCyciYEAST:G3O-32670-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ03629.
NextBioi977864.
PROiQ03629.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR009327. Cupin_DUF985.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF06172. Cupin_5. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. "A multidimensional chromatography technology for in-depth phosphoproteome analysis."
    Albuquerque C.P., Smolka M.B., Payne S.H., Bafna V., Eng J., Zhou H.
    Mol. Cell. Proteomics 7:1389-1396(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiYMH9_YEAST
AccessioniPrimary (citable) accession number: Q03629
Secondary accession number(s): D6W0K4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: May 11, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XIII
    Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.