Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Homeobox protein MSX-2

Gene

Msx2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Acts as a transcriptional regulator in bone development. Represses the ALPL promoter activity and antogonizes the stimulatory effect of DLX5 on ALPL expression during osteoblast differentiation. Probable morphogenetic role. May play a role in limb-pattern formation. In osteoblasts, suppresses transcription driven by the osteocalcin FGF response element (OCFRE). Binds to the homeodomain-response element of the ALPL promoter.2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi142 – 201HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

  • DNA binding Source: MGI
  • RNA polymerase II regulatory region sequence-specific DNA binding Source: NTNU_SB
  • sequence-specific DNA binding Source: MGI
  • transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Source: NTNU_SB
  • transcription cofactor activity Source: BHF-UCL
  • transcription factor activity, transcription factor binding Source: MGI
  • transcription factor binding Source: MGI
  • transcription regulatory region DNA binding Source: UniProtKB

GO - Biological processi

  • activation of meiosis Source: MGI
  • anterior/posterior pattern specification Source: MGI
  • BMP signaling pathway Source: MGI
  • BMP signaling pathway involved in heart development Source: MGI
  • bone morphogenesis Source: MGI
  • bone trabecula formation Source: MGI
  • branching involved in mammary gland duct morphogenesis Source: MGI
  • cartilage development Source: MGI
  • cellular response to estradiol stimulus Source: MGI
  • cellular response to growth factor stimulus Source: MGI
  • chondrocyte development Source: MGI
  • embryonic digit morphogenesis Source: MGI
  • embryonic forelimb morphogenesis Source: MGI
  • embryonic hindlimb morphogenesis Source: MGI
  • embryonic limb morphogenesis Source: MGI
  • embryonic nail plate morphogenesis Source: MGI
  • enamel mineralization Source: MGI
  • endochondral bone growth Source: MGI
  • epithelial to mesenchymal transition involved in endocardial cushion formation Source: MGI
  • frontal suture morphogenesis Source: MGI
  • mammary gland epithelium development Source: MGI
  • negative regulation of apoptotic process Source: MGI
  • negative regulation of cell proliferation Source: MGI
  • negative regulation of CREB transcription factor activity Source: MGI
  • negative regulation of fat cell differentiation Source: MGI
  • negative regulation of keratinocyte differentiation Source: MGI
  • negative regulation of transcription, DNA-templated Source: UniProtKB
  • negative regulation of transcription from RNA polymerase II promoter Source: BHF-UCL
  • negative regulation of transcription regulatory region DNA binding Source: BHF-UCL
  • odontogenesis Source: MGI
  • ossification Source: MGI
  • osteoblast development Source: MGI
  • osteoblast differentiation Source: UniProtKB
  • outflow tract morphogenesis Source: MGI
  • outflow tract septum morphogenesis Source: MGI
  • positive regulation of BMP signaling pathway Source: MGI
  • positive regulation of catagen Source: MGI
  • positive regulation of mesenchymal cell apoptotic process Source: MGI
  • positive regulation of osteoblast differentiation Source: MGI
  • regulation of apoptotic process Source: MGI
  • signal transduction involved in regulation of gene expression Source: MGI
  • stem cell differentiation Source: MGI
  • transcription, DNA-templated Source: UniProtKB-KW
  • wound healing Source: MGI
  • wound healing, spreading of epidermal cells Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

Developmental protein, Repressor

Keywords - Biological processi

Osteogenesis, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox protein MSX-2
Alternative name(s):
Homeobox protein Hox-8-1
Gene namesi
Name:Msx2
Synonyms:Hox-8.1, Msx-2
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 13

Organism-specific databases

MGIiMGI:97169. Msx2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000491001 – 267Homeobox protein MSX-2Add BLAST267

Proteomic databases

PaxDbiQ03358.
PRIDEiQ03358.

PTM databases

PhosphoSitePlusiQ03358.

Expressioni

Tissue specificityi

Expressed in mesenchymal tissue in the developing spinal cord and limbs.

Inductioni

Up-regulated by BMP2.1 Publication

Gene expression databases

BgeeiENSMUSG00000021469.
CleanExiMM_MSX2.
ExpressionAtlasiQ03358. baseline and differential.
GenevisibleiQ03358. MM.

Interactioni

Subunit structurei

Interacts with MINT. Interacts with XRCC6 (Ku70) and XRCC5 (Ku80) (By similarity).By similarity

Binary interactionsi

WithEntry#Exp.IntActNotes
Maged1Q9QYH65EBI-1801354,EBI-1801274
NdnP252333EBI-1801354,EBI-1801080

GO - Molecular functioni

  • transcription factor binding Source: MGI

Protein-protein interaction databases

BioGridi201537. 4 interactors.
IntActiQ03358. 3 interactors.
STRINGi10090.ENSMUSP00000021922.

Structurei

3D structure databases

ProteinModelPortaliQ03358.
SMRiQ03358.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Msh homeobox family.Curated
Contains 1 homeobox DNA-binding domain.PROSITE-ProRule annotation

Keywords - Domaini

Homeobox

Phylogenomic databases

eggNOGiKOG0492. Eukaryota.
ENOG410YT2J. LUCA.
GeneTreeiENSGT00860000133666.
HOGENOMiHOG000231922.
HOVERGENiHBG005205.
InParanoidiQ03358.
KOiK09341.
OMAiTSWIQEA.
OrthoDBiEOG091G0P1V.
PhylomeDBiQ03358.
TreeFamiTF350699.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q03358-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASPTKGGDL FSSDEEGPAV LAGPGPGPGG AEGSAEERRV KVSSLPFSVE
60 70 80 90 100
ALMSDKKPPK ESPAVPPDCA SAGAVLRPLL LPGHGVRDAH SPGPLVKPFE
110 120 130 140 150
TASVKSENSE DGAPWIQEPG RYSPPPRHMS PTTCTLRKHK TNRKPRTPFT
160 170 180 190 200
TSQLLALERK FRQKQYLSIA ERAEFSSSLN LTETQVKIWF QNRRAKAKRL
210 220 230 240 250
QEAELEKLKM AAKPMLPSGF SLPFPINSPL QAASIYGASY PFHRPVLPIP
260
PVGLYATPVG YGMYHLS
Length:267
Mass (Da):28,915
Last modified:June 1, 1994 - v2
Checksum:iF2F4528D6E9C951E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti11F → FF in CAA41945 (PubMed:1682128).Curated1
Sequence conflicti89A → R in AAC60657 (PubMed:8098007).Curated1
Sequence conflicti263M → I in CAA41945 (PubMed:1682128).Curated1
Sequence conflicti266L → V in CAA41945 (PubMed:1682128).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L11739, L11738 Unassigned DNA. Translation: AAA03477.1.
S60460, S60698 Genomic DNA. Translation: AAC60657.2.
X59252 mRNA. Translation: CAA41945.1.
M38576 Genomic DNA. Translation: AAA37824.1.
CCDSiCCDS26522.1.
PIRiA46122.
PS0410.
S18814.
RefSeqiNP_038629.2. NM_013601.2.
UniGeneiMm.1763.

Genome annotation databases

EnsembliENSMUST00000021922; ENSMUSP00000021922; ENSMUSG00000021469.
GeneIDi17702.
KEGGimmu:17702.
UCSCiuc007qnw.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L11739, L11738 Unassigned DNA. Translation: AAA03477.1.
S60460, S60698 Genomic DNA. Translation: AAC60657.2.
X59252 mRNA. Translation: CAA41945.1.
M38576 Genomic DNA. Translation: AAA37824.1.
CCDSiCCDS26522.1.
PIRiA46122.
PS0410.
S18814.
RefSeqiNP_038629.2. NM_013601.2.
UniGeneiMm.1763.

3D structure databases

ProteinModelPortaliQ03358.
SMRiQ03358.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi201537. 4 interactors.
IntActiQ03358. 3 interactors.
STRINGi10090.ENSMUSP00000021922.

PTM databases

PhosphoSitePlusiQ03358.

Proteomic databases

PaxDbiQ03358.
PRIDEiQ03358.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000021922; ENSMUSP00000021922; ENSMUSG00000021469.
GeneIDi17702.
KEGGimmu:17702.
UCSCiuc007qnw.1. mouse.

Organism-specific databases

CTDi4488.
MGIiMGI:97169. Msx2.

Phylogenomic databases

eggNOGiKOG0492. Eukaryota.
ENOG410YT2J. LUCA.
GeneTreeiENSGT00860000133666.
HOGENOMiHOG000231922.
HOVERGENiHBG005205.
InParanoidiQ03358.
KOiK09341.
OMAiTSWIQEA.
OrthoDBiEOG091G0P1V.
PhylomeDBiQ03358.
TreeFamiTF350699.

Miscellaneous databases

PROiQ03358.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000021469.
CleanExiMM_MSX2.
ExpressionAtlasiQ03358. baseline and differential.
GenevisibleiQ03358. MM.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR020479. Homeobox_metazoa.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
PRINTSiPR00024. HOMEOBOX.
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMSX2_MOUSE
AccessioniPrimary (citable) accession number: Q03358
Secondary accession number(s): Q63856
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: June 1, 1994
Last modified: November 30, 2016
This is version 148 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.