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Protein

Protein RhiB

Gene

rhiB

Organism
Rhizobium leguminosarum bv. viciae
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

May be involved in plant-microbe interaction.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein RhiB
Gene namesi
Name:rhiB
Encoded oniPlasmid sym pRL1JI0 Publication
OrganismiRhizobium leguminosarum bv. viciae
Taxonomic identifieri387 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 219219Protein RhiBPRO_0000097326Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ03314.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di3.90.1340.10. 1 hit.
InterProiIPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q03314-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVPVVADSW HSFPHTSILP EEPTMFAGPP IGAVCPFAGQ VAPISSSVNT
60 70 80 90 100
IWSNTPCASS GEAAGTNAEA PISYVEAQGW MLCDGRYLRA AVYPELYAVL
110 120 130 140 150
GGLYGERNST ADLEFRIPDY RGLFLRGFDA GGGMDPDAKR RLDPTGNNVA
160 170 180 190 200
NVVGSLQCDA LQVHAHPYEI TTPAGISQQG NAAGTSISSK STGSPENPAR
210
TALETRPKNV AVNYLIKFR
Length:219
Mass (Da):23,142
Last modified:October 1, 1993 - v1
Checksum:i924D38B7A69E6BA5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M98835 Genomic DNA. Translation: AAA26358.1.
PIRiB41887.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M98835 Genomic DNA. Translation: AAA26358.1.
PIRiB41887.

3D structure databases

ProteinModelPortaliQ03314.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.90.1340.10. 1 hit.
InterProiIPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Molecular characterization and regulation of the rhizosphere-expressed genes rhiABCR that can influence nodulation by Rhizobium leguminosarum biovar viciae."
    Cubo M.T., Economou A., Murphy G.J., Johnston A.W., Downie J.A.
    J. Bacteriol. 174:4026-4035(1991) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiRHIB_RHILV
AccessioniPrimary (citable) accession number: Q03314
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: December 11, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Plasmid

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.