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Q03246 (RT17_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 104. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
37S ribosomal protein S17, mitochondrial
Gene names
Name:MRPS17
Ordered Locus Names:YMR188C
ORF Names:YM8010.18C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

May have a meiosis-specific role as it accumulates during the middle stage of sporulation. Ref.8

Subunit structure

Component of the mitochondrial small ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S). Ref.4

Subcellular location

Mitochondrion Ref.5 Ref.7 Ref.8.

Miscellaneous

Present with 2810 molecules/cell in log phase SD medium.

Sequence similarities

Belongs to the ribosomal protein S17P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 23723737S ribosomal protein S17, mitochondrial HAMAP-Rule MF_01345_B
PRO_0000128525

Sequences

Sequence LengthMass (Da)Tools
Q03246 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: F9D606434D1310D6

FASTA23727,635
        10         20         30         40         50         60 
MARQNFLGLV VSQGKMQKTV KVRVETKVFN KKINKELFHR RDYLVHDEGE ISREGDLVRI 

        70         80         90        100        110        120 
EATRPLSKRK FFAIAEIIRN KGQQFALYES EAQLSVAKEE AQKAKEFLDK RSVRENKLNE 

       130        140        150        160        170        180 
KTTLLRDIRT IQDALSSGST PKELLEIKQR YGIQDFSQET VRQLLQLDIS GLEVNLEKQR 

       190        200        210        220        230 
SLIDRIQTRL SELLSNDLKC DQFLKDHGVE DPLTLKKNIK KNLLRKHVMM DMQQPSQ 

« Hide

References

« Hide 'large scale' references
[1]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII."
Bowman S., Churcher C.M., Badcock K., Brown D., Chillingworth T., Connor R., Dedman K., Devlin K., Gentles S., Hamlin N., Hunt S., Jagels K., Lye G., Moule S., Odell C., Pearson D., Rajandream M.A., Rice P. expand/collapse author list , Skelton J., Walsh S.V., Whitehead S., Barrell B.G.
Nature 387:90-93(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[2]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[3]"Genetics of the synthesis of serine from glycine and the utilization of glycine as sole nitrogen source by Saccharomyces cerevisiae."
Sinclair D.A., Dawes I.W.
Genetics 140:1213-1222(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-47.
[4]"Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components."
Gan X., Kitakawa M., Yoshino K., Oshiro N., Yonezawa K., Isono K.
Eur. J. Biochem. 269:5203-5214(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION IN THE MITOCHONDRIAL RIBOSOMAL SMALL COMPLEX, IDENTIFICATION BY MASS SPECTROMETRY.
[5]"Global analysis of protein localization in budding yeast."
Huh W.-K., Falvo J.V., Gerke L.C., Carroll A.S., Howson R.W., Weissman J.S., O'Shea E.K.
Nature 425:686-691(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
[6]"Global analysis of protein expression in yeast."
Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.
Nature 425:737-741(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
[7]"The proteome of Saccharomyces cerevisiae mitochondria."
Sickmann A., Reinders J., Wagner Y., Joppich C., Zahedi R.P., Meyer H.E., Schoenfisch B., Perschil I., Chacinska A., Guiard B., Rehling P., Pfanner N., Meisinger C.
Proc. Natl. Acad. Sci. U.S.A. 100:13207-13212(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
Strain: ATCC 76625 / YPH499.
[8]"Analysis of the meiotic role of the mitochondrial ribosomal proteins Mrps17 and Mrpl37 in Saccharomyces cerevisiae."
Hanlon S.E., Xu Z., Norris D.N., Vershon A.K.
Yeast 21:1241-1252(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: FUNCTION, SUBCELLULAR LOCATION.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z49808 Genomic DNA. Translation: CAA89921.1.
U20641 Genomic DNA. Translation: AAB18932.1.
BK006946 Genomic DNA. Translation: DAA10086.1.
PIRS55135.
RefSeqNP_013913.1. NM_001182694.1.

3D structure databases

ProteinModelPortalQ03246.
SMRQ03246. Positions 2-81.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid35366. 42 interactions.
DIPDIP-6688N.
IntActQ03246. 6 interactions.
MINTMINT-615939.

Proteomic databases

PaxDbQ03246.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYMR188C; YMR188C; YMR188C.
GeneID855226.
KEGGsce:YMR188C.

Organism-specific databases

CYGDYMR188c.
SGDS000004800. MRPS17.

Phylogenomic databases

eggNOGCOG0186.
HOGENOMHOG000248070.
KOK02961.
OMAIIRNKGQ.
OrthoDBEOG7XWQ1B.

Enzyme and pathway databases

BioCycYEAST:G3O-32876-MONOMER.

Gene expression databases

GenevestigatorQ03246.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_01345_B. Ribosomal_S17_B.
InterProIPR012340. NA-bd_OB-fold.
IPR000266. Ribosomal_S17.
[Graphical view]
PANTHERPTHR10744. PTHR10744. 1 hit.
PfamPF00366. Ribosomal_S17. 1 hit.
[Graphical view]
ProDomPD001295. Ribosomal_S17. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Other

NextBio978756.

Entry information

Entry nameRT17_YEAST
AccessionPrimary (citable) accession number: Q03246
Secondary accession number(s): D6W012, Q02523
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: April 16, 2014
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XIII

Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries