Q03167 (TGBR3_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
April 3, 2013.
Version 119.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Transforming growth factor beta receptor type 3 Short name=TGF-beta receptor type 3 Short name=TGFR-3 Alternative name(s): Betaglycan Transforming growth factor beta receptor III Short name=TGF-beta receptor type III | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 851 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Binds to TGF-beta. Could be involved in capturing and retaining TGF-beta for presentation to the signaling receptors. |
| Subunit structure | Interacts with TCTEX1D4. Ref.7 |
| Subcellular location | Secreted. Secreted › extracellular space. Cell membrane; Single-pass type I membrane protein Potential. Note: Exists both as a membrane-bound form and as soluble form in serum and in the extracellular matrix. |
| Post-translational modification | Extensively modified by glycosaminoglycan groups (GAG). |
| Sequence similarities | Contains 1 ZP domain. |
| Sequence caution | The sequence AAA67061.1 differs from that shown. Reason: Frameshift at positions 70, 73, 349 and 350. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| TGFB1 | P01137 | 2 | EBI-2852679,EBI-779636 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q03167-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q03167-2) The sequence of this isoform differs from the canonical sequence as follows: 359-359: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||||
Molecule processing | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 20 | 20 | Potential | ||||||||
| Chain | 21 – 851 | 831 | Transforming growth factor beta receptor type 3 | PRO_0000041663 | |||||||
Regions | |||||||||||
| Topological domain | 21 – 787 | 767 | Extracellular Potential | ||||||||
| Transmembrane | 788 – 809 | 22 | Helical; Potential | ||||||||
| Topological domain | 810 – 851 | 42 | Cytoplasmic Potential | ||||||||
| Domain | 455 – 730 | 276 | ZP | ||||||||
Amino acid modifications | |||||||||||
| Glycosylation | 141 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 492 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 534 | 1 | O-linked (Xyl...) (glycosaminoglycan) By similarity | ||||||||
| Glycosylation | 545 | 1 | O-linked (Xyl...) (glycosaminoglycan) By similarity | ||||||||
| Glycosylation | 571 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 590 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Glycosylation | 697 | 1 | N-linked (GlcNAc...) Potential | ||||||||
| Disulfide bond | 639 ↔ 705 | By similarity | |||||||||
| Disulfide bond | 660 ↔ 730 | By similarity | |||||||||
Natural variations | |||||||||||
| Alternative sequence | 359 | 1 | Missing in isoform 2. | VSP_040018 | |||||||
| Natural variant | 14 | 1 | S → N. Ref.3 Corresponds to variant rs17884205 [ dbSNP | Ensembl ]. | VAR_020891 | |||||||
| Natural variant | 15 | 1 | S → F. Ref.1 Ref.2 Ref.3 Corresponds to variant rs1805110 [ dbSNP | Ensembl ]. | VAR_014920 | |||||||
| Natural variant | 163 | 1 | W → L. Ref.3 Corresponds to variant rs17885124 [ dbSNP | Ensembl ]. | VAR_020892 | |||||||
| Natural variant | 351 | 1 | F → I. Corresponds to variant rs11466592 [ dbSNP | Ensembl ]. | VAR_057499 | |||||||
| Natural variant | 635 | 1 | A → T. Ref.3 | VAR_020893 | |||||||
| Natural variant | 765 | 1 | G → R. Ref.3 | VAR_020894 | |||||||
| Natural variant | 777 | 1 | P → S. Corresponds to variant rs35352606 [ dbSNP | Ensembl ]. | VAR_066625 | |||||||
Experimental info | |||||||||||
| Sequence conflict | 89 | 1 | P → S in BAF84034. Ref.4 | ||||||||
| Sequence conflict | 238 | 1 | I → V in BAF84034. Ref.4 | ||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Molecular cloning and characterization of the human and porcine transforming growth factor-beta type III receptors." Moren A., Ichijo H., Miyazono K. Biochem. Biophys. Res. Commun. 189:356-362(1992) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), VARIANT PHE-15. Tissue: Placenta. |
| [2] | "Eleven single nucleotide polymorphisms and one triple nucleotide insertion of the human TGF-beta III receptor gene." Zippert R., Baessler A., Holmer S.R., Hengstenberg C., Schunkert H. J. Hum. Genet. 45:250-253(2000) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), VARIANT PHE-15. Tissue: Blood. |
| [3] | NIEHS SNPs program Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS ASN-14; PHE-15; LEU-163; THR-635 AND ARG-765. |
| [4] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Tongue. |
| [5] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [6] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Brain. |
| [7] | "Identification of Tctex2beta, a novel dynein light chain family member that interacts with different transforming growth factor-beta receptors." Meng Q.-J., Lux A., Holloschi A., Li J., Hughes J.M.X., Foerg T., McCarthy J.E.G., Heagerty A.M., Kioschis P., Hafner M., Garland J.M. J. Biol. Chem. 281:37069-37080(2006) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH TCTEX1D4. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | L07594 mRNA. Translation: AAA67061.1. Frameshift. AJ251961 mRNA. Translation: CAB64374.1. AY796304 Genomic DNA. Translation: AAV50003.1. AK291345 mRNA. Translation: BAF84034.1. AL162263, AL390780, AL445992 Genomic DNA. Translation: CAI22636.1. AL162263 AL445992 Genomic DNA. Translation: CAI22637.1.AL390780, AL162263, AL445992 Genomic DNA. Translation: CAI14570.1. AL390780 AL445992 Genomic DNA. Translation: CAI14571.1.AL445992, AL162263, AL390780 Genomic DNA. Translation: CAI13392.1. AL445992 AL390780 Genomic DNA. Translation: CAI13393.1.BC126116 mRNA. Translation: AAI26117.1. BC136295 mRNA. Translation: AAI36296.1. |
| IPI | IPI00304865. IPI00971143. |
| PIR | JC1350. |
| RefSeq | NP_001182612.1. NM_001195683.1. NP_001182613.1. NM_001195684.1. NP_003234.2. NM_003243.4. |
| UniGene | Hs.482390. Hs.735919. |
3D structure databases | |
| ProteinModelPortal | Q03167. |
| SMR | Q03167. Positions 587-755. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP-5940N. |
| IntAct | Q03167. 2 interactions. |
| MINT | MINT-1785606. |
| STRING | 9606.ENSP00000212355. |
PTM databases | |
| PhosphoSite | Q03167. |
Polymorphism databases | |
| DMDM | 311033535. |
Proteomic databases | |
| PaxDb | Q03167. |
| PRIDE | Q03167. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000212355; ENSP00000212355; ENSG00000069702. ENST00000370399; ENSP00000359426; ENSG00000069702. ENST00000465892; ENSP00000432638; ENSG00000069702. ENST00000525962; ENSP00000436127; ENSG00000069702. |
| GeneID | 7049. |
| KEGG | hsa:7049. |
| UCSC | uc001doh.3. human. uc001doi.3. human. |
Organism-specific databases | |
| CTD | 7049. |
| GeneCards | GC01M092145. |
| H-InvDB | HIX0028622. |
| HGNC | HGNC:11774. TGFBR3. |
| HPA | CAB018971. HPA008257. |
| MIM | 600742. gene. |
| neXtProt | NX_Q03167. |
| PharmGKB | PA36487. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | NOG40778. |
| HOGENOM | HOG000090193. |
| HOVERGEN | HBG057515. |
| KO | K05843. |
| OMA | IENICPK. |
| OrthoDB | EOG4PVNXW. |
Enzyme and pathway databases | |
| Pathway_Interaction_DB | tgfbrpathway. TGF-beta receptor signaling. |
Gene expression databases | |
| ArrayExpress | Q03167. |
| Bgee | Q03167. |
| CleanEx | HS_TGFBR3. |
| Genevestigator | Q03167. |
| GermOnline | ENSG00000069702. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR001507. ZP_dom. IPR017977. ZP_dom_CS. [Graphical view] |
| Pfam | PF00100. Zona_pellucida. 1 hit. [Graphical view] |
| PRINTS | PR00023. ZPELLUCIDA. |
| SMART | SM00241. ZP. 1 hit. [Graphical view] |
| PROSITE | PS00682. ZP_1. 1 hit. PS51034. ZP_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other | |
| ChiTaRS | TGFBR3. human. |
| GenomeRNAi | 7049. |
| NextBio | 27547. |
| SOURCE | Search... |
Entry information
| Entry name | TGBR3_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q03167 Secondary accession number(s): A0AUW8 Q9UGI2 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

Clusters with
