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Q03079 (YP041_YEAST) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized membrane protein YPL041C
Gene names
Ordered Locus Names:YPL041C
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) [Reference proteome]
Taxonomic identifier559292 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 207207Uncharacterized membrane protein YPL041C
PRO_0000238638

Regions

Topological domain1 – 9898Cytoplasmic Potential
Transmembrane99 – 11921Helical; Potential
Topological domain120 – 17758Extracellular Potential
Transmembrane178 – 19821Helical; Potential
Topological domain199 – 2079Cytoplasmic Potential

Experimental info

Sequence conflict108 – 1125ILPLF → NTTTV in AAT01100. Ref.1

Sequences

Sequence LengthMass (Da)Tools
Q03079 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: FBB5FE92EDCA2301

FASTA20724,166
        10         20         30         40         50         60 
MTVMNLFFRP CQLQMGSGPL ELMLKRPTQL TTFMNTRPGG STQIRFISGN LDPVKRREDR 

        70         80         90        100        110        120 
LRKIFSKSRL LTRLNKNPKF SHYFDRLSEA GTVPTLTSFF ILHEVTAILP LFLLWWLLYN 

       130        140        150        160        170        180 
LDLSDDFKLP NFLNGLMDSC HTAMEKFVGK RYQECLNKNK LILSGTVAYV TVKLLYPVRI 

       190        200 
FISIWGAPYF GKWLLLPFQK LKHLIKK 

« Hide

References

« Hide 'large scale' references
[1]"The LAF1 open reading frame encodes a second isoleucyl tRNA synthetase in the yeast Saccharomyces cerevisiae."
Chen E., Bretscher A.P.
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M. expand/collapse author list , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[3]Saccharomyces Genome Database
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: ATCC 204508 / S288c.
[4]"Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae."
Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S., Jepson D., Richardson A., Raphael J., Moreira D., Taycher E., Zuo D., Mohr S., Kane M.F., Williamson J. expand/collapse author list , Simpson A.J.G., Bulyk M.L., Harlow E., Marsischky G., Kolodner R.D., LaBaer J.
Genome Res. 17:536-543(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Strain: ATCC 204508 / S288c.
[5]"A global topology map of the Saccharomyces cerevisiae membrane proteome."
Kim H., Melen K., Oesterberg M., von Heijne G.
Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
Strain: ATCC 208353 / W303-1A.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L32174 Genomic DNA. Translation: AAT01100.1.
U44030 Genomic DNA. Translation: AAB68179.1.
AY558328 Genomic DNA. Translation: AAS56654.1.
BK006949 Genomic DNA. Translation: DAA11388.1.
PIRS62034.
RefSeqNP_015284.1. NM_001183855.1.

3D structure databases

ProteinModelPortalQ03079.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid36138. 40 interactions.
STRING4932.YPL041C.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiYPL041C; YPL041C; YPL041C.
GeneID856066.
KEGGsce:YPL041C.

Organism-specific databases

CYGDYPL041c.
SGDS000005962. YPL041C.

Phylogenomic databases

eggNOGNOG140651.
HOGENOMHOG000066028.
OMAYPARILF.
OrthoDBEOG7F254Z.

Enzyme and pathway databases

BioCycYEAST:G3O-33955-MONOMER.

Gene expression databases

GenevestigatorQ03079.

Family and domain databases

InterProIPR018811. Uncharacterised_FLILHELTA.
[Graphical view]
PfamPF10306. FLILHELTA. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio981050.

Entry information

Entry nameYP041_YEAST
AccessionPrimary (citable) accession number: Q03079
Secondary accession number(s): D6W3X2, Q6LE92
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

Yeast chromosome XVI

Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD