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Q03079

- YP041_YEAST

UniProt

Q03079 - YP041_YEAST

Protein

Uncharacterized membrane protein YPL041C

Gene

YPL041C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 87 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciYEAST:G3O-33955-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Uncharacterized membrane protein YPL041C
    Gene namesi
    Ordered Locus Names:YPL041C
    OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
    Taxonomic identifieri559292 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
    ProteomesiUP000002311: Chromosome XVI

    Organism-specific databases

    CYGDiYPL041c.
    SGDiS000005962. YPL041C.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 207207Uncharacterized membrane protein YPL041CPRO_0000238638Add
    BLAST

    Proteomic databases

    MaxQBiQ03079.

    Expressioni

    Gene expression databases

    GenevestigatoriQ03079.

    Interactioni

    Protein-protein interaction databases

    BioGridi36138. 41 interactions.
    STRINGi4932.YPL041C.

    Structurei

    3D structure databases

    ProteinModelPortaliQ03079.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 9898CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini120 – 17758ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini199 – 2079CytoplasmicSequence Analysis

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei99 – 11921HelicalSequence AnalysisAdd
    BLAST
    Transmembranei178 – 19821HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG140651.
    HOGENOMiHOG000066028.
    OMAiYPARILF.
    OrthoDBiEOG7F254Z.

    Family and domain databases

    InterProiIPR018811. Uncharacterised_FLILHELTA.
    [Graphical view]
    PfamiPF10306. FLILHELTA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q03079-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTVMNLFFRP CQLQMGSGPL ELMLKRPTQL TTFMNTRPGG STQIRFISGN    50
    LDPVKRREDR LRKIFSKSRL LTRLNKNPKF SHYFDRLSEA GTVPTLTSFF 100
    ILHEVTAILP LFLLWWLLYN LDLSDDFKLP NFLNGLMDSC HTAMEKFVGK 150
    RYQECLNKNK LILSGTVAYV TVKLLYPVRI FISIWGAPYF GKWLLLPFQK 200
    LKHLIKK 207
    Length:207
    Mass (Da):24,166
    Last modified:November 1, 1996 - v1
    Checksum:iFBB5FE92EDCA2301
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti108 – 1125ILPLF → NTTTV in AAT01100. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L32174 Genomic DNA. Translation: AAT01100.1.
    U44030 Genomic DNA. Translation: AAB68179.1.
    AY558328 Genomic DNA. Translation: AAS56654.1.
    BK006949 Genomic DNA. Translation: DAA11388.1.
    PIRiS62034.
    RefSeqiNP_015284.1. NM_001183855.1.

    Genome annotation databases

    EnsemblFungiiYPL041C; YPL041C; YPL041C.
    GeneIDi856066.
    KEGGisce:YPL041C.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L32174 Genomic DNA. Translation: AAT01100.1 .
    U44030 Genomic DNA. Translation: AAB68179.1 .
    AY558328 Genomic DNA. Translation: AAS56654.1 .
    BK006949 Genomic DNA. Translation: DAA11388.1 .
    PIRi S62034.
    RefSeqi NP_015284.1. NM_001183855.1.

    3D structure databases

    ProteinModelPortali Q03079.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 36138. 41 interactions.
    STRINGi 4932.YPL041C.

    Proteomic databases

    MaxQBi Q03079.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii YPL041C ; YPL041C ; YPL041C .
    GeneIDi 856066.
    KEGGi sce:YPL041C.

    Organism-specific databases

    CYGDi YPL041c.
    SGDi S000005962. YPL041C.

    Phylogenomic databases

    eggNOGi NOG140651.
    HOGENOMi HOG000066028.
    OMAi YPARILF.
    OrthoDBi EOG7F254Z.

    Enzyme and pathway databases

    BioCyci YEAST:G3O-33955-MONOMER.

    Miscellaneous databases

    NextBioi 981050.

    Gene expression databases

    Genevestigatori Q03079.

    Family and domain databases

    InterProi IPR018811. Uncharacterised_FLILHELTA.
    [Graphical view ]
    Pfami PF10306. FLILHELTA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The LAF1 open reading frame encodes a second isoleucyl tRNA synthetase in the yeast Saccharomyces cerevisiae."
      Chen E., Bretscher A.P.
      Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
      Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
      , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
      Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    3. Cited for: GENOME REANNOTATION.
      Strain: ATCC 204508 / S288c.
    4. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: ATCC 204508 / S288c.
    5. "A global topology map of the Saccharomyces cerevisiae membrane proteome."
      Kim H., Melen K., Oesterberg M., von Heijne G.
      Proc. Natl. Acad. Sci. U.S.A. 103:11142-11147(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: ATCC 208353 / W303-1A.

    Entry informationi

    Entry nameiYP041_YEAST
    AccessioniPrimary (citable) accession number: Q03079
    Secondary accession number(s): D6W3X2, Q6LE92
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2006
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 87 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Yeast
      Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
    2. Yeast chromosome XVI
      Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

    External Data

    Dasty 3