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Q03056

- NSP6_ROTPY

UniProt

Q03056 - NSP6_ROTPY

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Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain Pig/Mexico/YM/1983 G11-P9[7]-I5-R1-C1-M1-A8-N1-T1-E1-H1) (RV-A)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Non-structural protein 6
Short name:
NSP6
OrganismiRotavirus A (strain Pig/Mexico/YM/1983 G11-P9[7]-I5-R1-C1-M1-A8-N1-T1-E1-H1) (RV-A)
Taxonomic identifieri10919 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
Virus hostiSus scrofa (Pig) [TaxID: 9823]

Subcellular locationi

Host cytoplasm 1 Publication
Note: Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging.

GO - Cellular componenti

  1. host cell cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Host cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 9292Non-structural protein 6PRO_0000149645Add
BLAST

Interactioni

Subunit structurei

Interacts with NSP5.1 Publication

Family & Domainsi

Sequence similaritiesi

Belongs to the rotavirus A NSP6 family.Curated

Family and domain databases

InterProiIPR006950. Rotavirus_NSP6.
[Graphical view]
PfamiPF04866. Rota_NS6. 1 hit.
[Graphical view]
ProDomiPD008065. Rota_NS6. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

Q03056-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRLLQRQLF LENLLVGVNS TFHQMQKHSI NTCCRSLQRI LDHLILLQTI
60 70 80 90
HSPVFRLDRM QLRQMQTLAC LWIHRRNHDL QVTLGAIKWI SP
Length:92
Mass (Da):10,981
Last modified:June 1, 1994 - v1
Checksum:i784F6BAF637D0A84
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X69486 Genomic RNA. Translation: CAA49242.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X69486 Genomic RNA. Translation: CAA49242.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

InterProi IPR006950. Rotavirus_NSP6.
[Graphical view ]
Pfami PF04866. Rota_NS6. 1 hit.
[Graphical view ]
ProDomi PD008065. Rota_NS6. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
ProtoNeti Search...

Publicationsi

  1. "Protein NS26 is highly conserved among porcine rotavirus strains."
    Lopez S., Arias C.F.
    Nucleic Acids Res. 21:1042-1042(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
  2. "The C-terminal domain of rotavirus NSP5 is essential for its multimerization, hyperphosphorylation and interaction with NSP6."
    Torres-Vega M.A., Gonzalez R.A., Duarte M., Poncet D., Lopez S., Arias C.F.
    J. Gen. Virol. 81:821-830(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: INTERACTION WITH NSP5, SUBCELLULAR LOCATION.

Entry informationi

Entry nameiNSP6_ROTPY
AccessioniPrimary (citable) accession number: Q03056
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: October 29, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3