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Q03056

- NSP6_ROTPY

UniProt

Q03056 - NSP6_ROTPY

Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain Pig/Mexico/YM/1983 G11-P9[7]-I5-R1-C1-M1-A8-N1-T1-E1-H1) (RV-A)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Non-structural protein 6
    Short name:
    NSP6
    OrganismiRotavirus A (strain Pig/Mexico/YM/1983 G11-P9[7]-I5-R1-C1-M1-A8-N1-T1-E1-H1) (RV-A)
    Taxonomic identifieri10919 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirus
    Virus hostiSus scrofa (Pig) [TaxID: 9823]

    Subcellular locationi

    Host cytoplasm 1 Publication
    Note: Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging.

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9292Non-structural protein 6PRO_0000149645Add
    BLAST

    Interactioni

    Subunit structurei

    Interacts with NSP5.1 Publication

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the rotavirus A NSP6 family.Curated

    Family and domain databases

    InterProiIPR006950. Rotavirus_NSP6.
    [Graphical view]
    PfamiPF04866. Rota_NS6. 1 hit.
    [Graphical view]
    ProDomiPD008065. Rota_NS6. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Q03056-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRLLQRQLF LENLLVGVNS TFHQMQKHSI NTCCRSLQRI LDHLILLQTI   50
    HSPVFRLDRM QLRQMQTLAC LWIHRRNHDL QVTLGAIKWI SP 92
    Length:92
    Mass (Da):10,981
    Last modified:June 1, 1994 - v1
    Checksum:i784F6BAF637D0A84
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X69486 Genomic RNA. Translation: CAA49242.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X69486 Genomic RNA. Translation: CAA49242.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR006950. Rotavirus_NSP6.
    [Graphical view ]
    Pfami PF04866. Rota_NS6. 1 hit.
    [Graphical view ]
    ProDomi PD008065. Rota_NS6. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Protein NS26 is highly conserved among porcine rotavirus strains."
      Lopez S., Arias C.F.
      Nucleic Acids Res. 21:1042-1042(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    2. "The C-terminal domain of rotavirus NSP5 is essential for its multimerization, hyperphosphorylation and interaction with NSP6."
      Torres-Vega M.A., Gonzalez R.A., Duarte M., Poncet D., Lopez S., Arias C.F.
      J. Gen. Virol. 81:821-830(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH NSP5, SUBCELLULAR LOCATION.

    Entry informationi

    Entry nameiNSP6_ROTPY
    AccessioniPrimary (citable) accession number: Q03056
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 1, 1994
    Last sequence update: June 1, 1994
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3