##gff-version 3 Q03053 UniProtKB Initiator methionine 1 1 . . . Note=Removed%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Chain 2 2185 . . . ID=PRO_0000426326;Note=Genome polyprotein Q03053 UniProtKB Chain 2 851 . . . ID=PRO_0000426327;Note=P1 Q03053 UniProtKB Chain 2 330 . . . ID=PRO_0000426328;Note=Capsid protein VP0 Q03053 UniProtKB Chain 2 69 . . . ID=PRO_0000426329;Note=Capsid protein VP4 Q03053 UniProtKB Chain 70 330 . . . ID=PRO_0000426330;Note=Capsid protein VP2 Q03053 UniProtKB Chain 331 568 . . . ID=PRO_0000426331;Note=Capsid protein VP3 Q03053 UniProtKB Chain 569 851 . . . ID=PRO_0000426332;Note=Capsid protein VP1 Q03053 UniProtKB Chain 852 1429 . . . ID=PRO_0000426333;Note=P2 Q03053 UniProtKB Chain 852 1001 . . . ID=PRO_0000426334;Note=Protease 2A Q03053 UniProtKB Chain 1002 1100 . . . ID=PRO_0000039631;Note=Protein 2B Q03053 UniProtKB Chain 1101 1429 . . . ID=PRO_0000039632;Note=Protein 2C Q03053 UniProtKB Chain 1430 2185 . . . ID=PRO_0000426335;Note=P3 Q03053 UniProtKB Chain 1430 1540 . . . ID=PRO_0000426336;Note=Protein 3AB Q03053 UniProtKB Chain 1430 1518 . . . ID=PRO_0000039633;Note=Protein 3A Q03053 UniProtKB Chain 1519 1540 . . . ID=PRO_0000426337;Note=Viral protein genome-linked Q03053 UniProtKB Chain 1541 2185 . . . ID=PRO_0000426338;Note=Protein 3CD Q03053 UniProtKB Chain 1541 1723 . . . ID=PRO_0000426339;Note=Protease 3C Q03053 UniProtKB Chain 1724 2185 . . . ID=PRO_0000426340;Note=RNA-directed RNA polymerase Q03053 UniProtKB Topological domain 2 1495 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q03053 UniProtKB Intramembrane 1496 1511 . . . Ontology_term=ECO:0000255;evidence=ECO:0000255 Q03053 UniProtKB Topological domain 1512 2185 . . . Note=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q03053 UniProtKB Domain 1205 1361 . . . Note=SF3 helicase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00551 Q03053 UniProtKB Domain 1541 1719 . . . Note=Peptidase C3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q03053 UniProtKB Domain 1950 2066 . . . Note=RdRp catalytic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00539 Q03053 UniProtKB Zinc finger 1369 1386 . . . Note=C4-type%3B degenerate;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q03053 UniProtKB Region 566 582 . . . Note=Amphipathic alpha-helix;Ontology_term=ECO:0000255;evidence=ECO:0000255 Q03053 UniProtKB Region 1101 1239 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Region 1101 1173 . . . Note=Membrane-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Region 1122 1126 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Region 1413 1420 . . . Note=RNA-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Region 1424 1429 . . . Note=Oligomerization;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Active site 872 872 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Active site 890 890 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Active site 961 961 . . . Note=For protease 2A activity;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Active site 1580 1580 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q03053 UniProtKB Active site 1611 1611 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q03053 UniProtKB Active site 1687 1687 . . . Note=For protease 3C activity;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01222 Q03053 UniProtKB Binding site 907 907 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q03053 UniProtKB Binding site 909 909 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q03053 UniProtKB Binding site 967 967 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q03053 UniProtKB Binding site 969 969 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q9QF31 Q03053 UniProtKB Binding site 1369 1369 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q03053 UniProtKB Binding site 1381 1381 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q03053 UniProtKB Binding site 1386 1386 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:B9VUU3 Q03053 UniProtKB Binding site 1956 1956 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Binding site 1956 1956 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Binding site 2052 2052 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Binding site 2052 2052 . . . Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Site 69 70 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Site 330 331 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 851 852 . . . Note=Cleavage%3B by autolysis;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 1001 1002 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 1100 1101 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 1125 1125 . . . Note=Involved in the interaction with host RTN3;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q66478 Q03053 UniProtKB Site 1429 1430 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 1518 1519 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 1540 1541 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Site 1723 1724 . . . Note=Cleavage%3B by protease 3C;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03301 Q03053 UniProtKB Modified residue 1521 1521 . . . Note=O-(5'-phospho-RNA)-tyrosine;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300 Q03053 UniProtKB Lipidation 2 2 . . . Note=N-myristoyl glycine%3B by host;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P03300