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Protein
Submitted name:

Glycerol uptake facilitator related permease (Major Intrinsic Protein Family)

Gene

LACR_1487

Organism
Lactococcus lactis subsp. cremoris (strain SK11)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glycerol uptake facilitator related permease (Major Intrinsic Protein Family)Imported
Gene namesi
Ordered Locus Names:LACR_1487Imported
OrganismiLactococcus lactis subsp. cremoris (strain SK11)Imported
Taxonomic identifieri272622 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
Proteomesi
  • UP000000240 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 31HelicalSequence analysisAdd BLAST20
Transmembranei38 – 57HelicalSequence analysisAdd BLAST20
Transmembranei63 – 83HelicalSequence analysisAdd BLAST21
Transmembranei90 – 108HelicalSequence analysisAdd BLAST19
Transmembranei138 – 155HelicalSequence analysisAdd BLAST18
Transmembranei167 – 188HelicalSequence analysisAdd BLAST22
Transmembranei217 – 237HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ02YH6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the MIP/aquaporin (TC 1.A.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q02YH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSTFVQFLG EFIGTFILIL LGNGVVCAVS LKKTKAEGAG WIAIAFGWGL
60 70 80 90 100
AVMLGVYSSS FMSAAHLNPA VTIGMALIGN ISWSLVLPYI AGQFLGAMLA
110 120 130 140 150
SFILWLFYYP HWAETKDAAV ILGCHSTGPA IRHFPSNFFG EVIGTMVLLI
160 170 180 190 200
GILSFGRNHL ADGLSPALVG GLITAIGFSL GATTGYSLNP ARDLGPRIMH
210 220 230 240
ALLPIKNKGT SDWGYSWVPV LGPLVGGALG CLIFNSISPL IK
Length:242
Mass (Da):25,515
Last modified:November 14, 2006 - v1
Checksum:iA5F051589576B206
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000425 Genomic DNA. Translation: ABJ72996.1.
RefSeqiWP_011676357.1. NC_008527.1.

Genome annotation databases

EnsemblBacteriaiABJ72996; ABJ72996; LACR_1487.
KEGGillc:LACR_1487.
PATRICi22289835. VBILacLac38071_1664.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000425 Genomic DNA. Translation: ABJ72996.1.
RefSeqiWP_011676357.1. NC_008527.1.

3D structure databases

ProteinModelPortaliQ02YH6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABJ72996; ABJ72996; LACR_1487.
KEGGillc:LACR_1487.
PATRICi22289835. VBILacLac38071_1664.

Phylogenomic databases

HOGENOMiHOG000288285.
KOiK02440.
OMAiYMIGYGH.

Family and domain databases

Gene3Di1.20.1080.10. 1 hit.
InterProiIPR023271. Aquaporin-like.
IPR000425. MIP.
IPR022357. MIP_CS.
[Graphical view]
PANTHERiPTHR19139. PTHR19139. 1 hit.
PfamiPF00230. MIP. 1 hit.
[Graphical view]
PRINTSiPR00783. MINTRINSICP.
SUPFAMiSSF81338. SSF81338. 1 hit.
TIGRFAMsiTIGR00861. MIP. 1 hit.
PROSITEiPS00221. MIP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ02YH6_LACLS
AccessioniPrimary (citable) accession number: Q02YH6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 2, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.