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Protein
Submitted name:

Putative heparinase

Gene

PA14_23430

Organism
Pseudomonas aeruginosa (strain UCBPP-PA14)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciPAER208963:GI5K-1895-MONOMER.

Protein family/group databases

CAZyiPL12. Polysaccharide Lyase Family 12.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative heparinaseImported
Gene namesi
Ordered Locus Names:PA14_23430Imported
OrganismiPseudomonas aeruginosa (strain UCBPP-PA14)Imported
Taxonomic identifieri208963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000653 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi208963.PA14_23430.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5360.
HOGENOMiHOG000296827.
OMAiWEPYPIS.
OrthoDBiEOG6S267F.

Family and domain databases

InterProiIPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
PfamiPF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMiSSF48230. SSF48230. 1 hit.

Sequencei

Sequence statusi: Complete.

Q02PV8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALQKLVRLY HTLRYLRLKQ IIFRVYYRFA QVRVHIYRNV AVRRWRRDWS
60 70 80 90 100
APSWRNLSTN DAVEFTFLGI TGKVQCPEDW QADRSSKLWL YNLHYLDDLN
110 120 130 140 150
ARDIGSQPGL ADKLIQSWIQ ANPPVSGEGW EPYPLSLRIV NLVKWLARHD
160 170 180 190 200
ERSTFLADSL AVQADALVQQ VEYHILGNHL FANGKALVFA GAYLSGAMAD
210 220 230 240 250
RWLAKGLRIL DEELPEQFLN DGGHFELSPM YHATLLWDMC DLVNLSTRSG
260 270 280 290 300
LPDLAERLPQ WREVVVQGLK WLRSMQHPDG RISFFNDAAF GIAPEYEDIA
310 320 330 340 350
AYAKRLDISP PAHENHLAAI YNSATGYAAV LPADGVKAIL DLAKVGPDYQ
360 370 380 390 400
PGHAHADTLS FELSVFGKRL VVNSGTSQYG DDSERQRQRG TAAHNTVGLL
410 420 430 440 450
GYDSSEVWAG FRVARRAAVV IERFEVEPEI TCIQASHDGY GRLVKGLRHR
460 470 480 490 500
RTWTFTRTSM EIFDSITGDQ VVATSRFFFS PEVKVSMKAD GFVADMGAGK
510 520 530 540 550
KVSIDFSGSD DVRLISSTWH PEFGCSLANQ CLVATFSGDS LTTRICWGGI
Length:550
Mass (Da):61,874
Last modified:November 14, 2006 - v1
Checksum:i355BAE0565FDDB6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000438 Genomic DNA. Translation: ABJ12377.1.
RefSeqiWP_003138478.1. NC_008463.1.
YP_790028.1. NC_008463.1.

Genome annotation databases

EnsemblBacteriaiABJ12377; ABJ12377; PA14_23430.
KEGGipau:PA14_23430.
PATRICi19849873. VBIPseAer79785_1905.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000438 Genomic DNA. Translation: ABJ12377.1.
RefSeqiWP_003138478.1. NC_008463.1.
YP_790028.1. NC_008463.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208963.PA14_23430.

Protein family/group databases

CAZyiPL12. Polysaccharide Lyase Family 12.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABJ12377; ABJ12377; PA14_23430.
KEGGipau:PA14_23430.
PATRICi19849873. VBIPseAer79785_1905.

Phylogenomic databases

eggNOGiCOG5360.
HOGENOMiHOG000296827.
OMAiWEPYPIS.
OrthoDBiEOG6S267F.

Enzyme and pathway databases

BioCyciPAER208963:GI5K-1895-MONOMER.

Family and domain databases

InterProiIPR008929. Chondroitin_lyas.
IPR012480. Hepar_II_III.
[Graphical view]
PfamiPF07940. Hepar_II_III. 1 hit.
[Graphical view]
SUPFAMiSSF48230. SSF48230. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UCBPP-PA14Imported.

Entry informationi

Entry nameiQ02PV8_PSEAB
AccessioniPrimary (citable) accession number: Q02PV8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: April 1, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.