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Q02PM6

- Q02PM6_PSEAB

UniProt

Q02PM6 - Q02PM6_PSEAB

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Protein
Submitted name:

Uncharacterized protein

Gene

pelD

Organism
Pseudomonas aeruginosa (strain UCBPP-PA14)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi158 – 1581Magnesium 1Imported
Metal bindingi158 – 1581Magnesium 2Imported
Binding sitei161 – 1611Cyclicdiguanosine monophosphateImported
Metal bindingi163 – 1631Magnesium 3; via carbonyl oxygenImported
Metal bindingi194 – 1941Magnesium 1Imported
Metal bindingi205 – 2051Magnesium 3; via amide nitrogenImported
Metal bindingi215 – 2151Magnesium 3; via carbonyl oxygenImported
Metal bindingi362 – 3621Magnesium 4; via carbonyl oxygenImported
Metal bindingi365 – 3651Magnesium 5; via carbonyl oxygenImported
Metal bindingi367 – 3671Magnesium 2Imported
Metal bindingi372 – 3721Magnesium 4Imported
Metal bindingi390 – 3901Magnesium 1; via carbonyl oxygenImported
Metal bindingi391 – 3911Magnesium 2Imported
Binding sitei391 – 3911Cyclicdiguanosine monophosphateImported
Metal bindingi399 – 3991Magnesium 4Imported
Metal bindingi399 – 3991Magnesium 5Imported
Metal bindingi402 – 4021Magnesium 5Imported
Binding sitei402 – 4021Cyclicdiguanosine monophosphateImported

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi367 – 3704Cyclicdiguanosine monophosphateImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. nucleotide binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

MagnesiumImported, Metal-bindingImported, Nucleotide-bindingImported

Enzyme and pathway databases

BioCyciPAER208963:GI5K-1983-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:pelDImported
Ordered Locus Names:PA14_24510Imported
OrganismiPseudomonas aeruginosa (strain UCBPP-PA14)Imported
Taxonomic identifieri208963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000653: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi208963.PA14_24510.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DMZX-ray2.10A/B156-455[»]
4DN0X-ray2.30A156-455[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12548.
HOGENOMiHOG000247715.
OMAiSHERLEN.
OrthoDBiEOG6ND0FD.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR025201. KdpD_TM.
[Graphical view]
PfamiPF13493. DUF4118. 1 hit.
PF13492. GAF_3. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q02PM6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAHKDFTLA PRASGSVSWV ETLVISALAL GLGWWFSPDD PLQVNATFPW
60 70 80 90 100
VILAPLLLGM RYGFVRGLAS AALLVAALFA FRVQGVEAYA QVPAAFIVGV
110 120 130 140 150
LLCAMLVGEF RDIWERRLER LELANEYRQL RLDEFTRAHH ILRISHDRLE
160 170 180 190 200
QRVAGNDQSL RSSLLGLRQL LRELPGDEAP LDALAETVLA LLAQYGSLRI
210 220 230 240 250
AGLYRVRHDR TPEPQPLATL GEMPVLDADD LLVRTCLERG ELVSVRQELL
260 270 280 290 300
ERGEQRAHSA LQVCVPLVDT DGRILALLAV EQMPFFVFNE RTFSLLAILA
310 320 330 340 350
GHIADLLQSD RRALQLADID AQRFSQYLKR SLLDARDHGL PACLYAFELT
360 370 380 390 400
DARYGEEVQR LLEGSQRGLD VQLRLRNDEG RRVLLVLLPL TSAEGSQGYL
410 420 430 440 450
QRLRILFAER FGQARELESL GVRIRQYELD AGNDRQALGH FLFNECGLND

QQVAV
Length:455
Mass (Da):51,075
Last modified:November 14, 2006 - v1
Checksum:i8D024D52D32EF6C2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000438 Genomic DNA. Translation: ABJ12297.1.
RefSeqiYP_790110.1. NC_008463.1.

Genome annotation databases

EnsemblBacteriaiABJ12297; ABJ12297; PA14_24510.
GeneIDi4381085.
KEGGipau:PA14_24510.
PATRICi19850053. VBIPseAer79785_1987.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000438 Genomic DNA. Translation: ABJ12297.1 .
RefSeqi YP_790110.1. NC_008463.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4DMZ X-ray 2.10 A/B 156-455 [» ]
4DN0 X-ray 2.30 A 156-455 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 208963.PA14_24510.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ12297 ; ABJ12297 ; PA14_24510 .
GeneIDi 4381085.
KEGGi pau:PA14_24510.
PATRICi 19850053. VBIPseAer79785_1987.

Phylogenomic databases

eggNOGi NOG12548.
HOGENOMi HOG000247715.
OMAi SHERLEN.
OrthoDBi EOG6ND0FD.

Enzyme and pathway databases

BioCyci PAER208963:GI5K-1983-MONOMER.

Family and domain databases

Gene3Di 3.30.450.40. 1 hit.
InterProi IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR025201. KdpD_TM.
[Graphical view ]
Pfami PF13493. DUF4118. 1 hit.
PF13492. GAF_3. 1 hit.
[Graphical view ]
SMARTi SM00065. GAF. 1 hit.
[Graphical view ]
SUPFAMi SSF55781. SSF55781. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UCBPP-PA14Imported.
  2. "Structure of the cytoplasmic region of PelD, a degenerate diguanylate cyclase receptor that regulates exopolysaccharide production in Pseudomonas aeruginosa."
    Whitney J.C., Colvin K.M., Marmont L.S., Robinson H., Parsek M.R., Howell P.L.
    J. Biol. Chem. 287:23582-23593(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 156-455 IN COMPLEX WITH CYCLICDIGUANOSINE MONOPHOSPHATE AND MAGNESIUM.

Entry informationi

Entry nameiQ02PM6_PSEAB
AccessioniPrimary (citable) accession number: Q02PM6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: October 29, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteomeImported

External Data

Dasty 3