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Q02PM6

- Q02PM6_PSEAB

UniProt

Q02PM6 - Q02PM6_PSEAB

Protein
Submitted name:

Uncharacterized protein

Gene

pelD

Organism
Pseudomonas aeruginosa (strain UCBPP-PA14)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi158 – 1581Magnesium 1Imported
    Metal bindingi158 – 1581Magnesium 2Imported
    Binding sitei161 – 1611Cyclicdiguanosine monophosphateImported
    Metal bindingi163 – 1631Magnesium 3; via carbonyl oxygenImported
    Metal bindingi194 – 1941Magnesium 1Imported
    Metal bindingi205 – 2051Magnesium 3; via amide nitrogenImported
    Metal bindingi215 – 2151Magnesium 3; via carbonyl oxygenImported
    Metal bindingi362 – 3621Magnesium 4; via carbonyl oxygenImported
    Metal bindingi365 – 3651Magnesium 5; via carbonyl oxygenImported
    Metal bindingi367 – 3671Magnesium 2Imported
    Metal bindingi372 – 3721Magnesium 4Imported
    Metal bindingi390 – 3901Magnesium 1; via carbonyl oxygenImported
    Metal bindingi391 – 3911Magnesium 2Imported
    Binding sitei391 – 3911Cyclicdiguanosine monophosphateImported
    Metal bindingi399 – 3991Magnesium 4Imported
    Metal bindingi399 – 3991Magnesium 5Imported
    Metal bindingi402 – 4021Magnesium 5Imported
    Binding sitei402 – 4021Cyclicdiguanosine monophosphateImported

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi367 – 3704Cyclicdiguanosine monophosphateImported

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. nucleotide binding Source: UniProtKB-KW

    Keywords - Ligandi

    MagnesiumImported, Metal-bindingImported, Nucleotide-bindingImported

    Enzyme and pathway databases

    BioCyciPAER208963:GI5K-1983-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:pelDImported
    Ordered Locus Names:PA14_24510Imported
    OrganismiPseudomonas aeruginosa (strain UCBPP-PA14)Imported
    Taxonomic identifieri208963 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000000653: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi208963.PA14_24510.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4DMZX-ray2.10A/B156-455[»]
    4DN0X-ray2.30A156-455[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG12548.
    HOGENOMiHOG000247715.
    OMAiSHERLEN.
    OrthoDBiEOG6ND0FD.

    Family and domain databases

    Gene3Di3.30.450.40. 1 hit.
    InterProiIPR003018. GAF.
    IPR029016. GAF_dom_like.
    IPR025201. KdpD_TM.
    [Graphical view]
    PfamiPF13493. DUF4118. 1 hit.
    PF13492. GAF_3. 1 hit.
    [Graphical view]
    SMARTiSM00065. GAF. 1 hit.
    [Graphical view]
    SUPFAMiSSF55781. SSF55781. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q02PM6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSAHKDFTLA PRASGSVSWV ETLVISALAL GLGWWFSPDD PLQVNATFPW    50
    VILAPLLLGM RYGFVRGLAS AALLVAALFA FRVQGVEAYA QVPAAFIVGV 100
    LLCAMLVGEF RDIWERRLER LELANEYRQL RLDEFTRAHH ILRISHDRLE 150
    QRVAGNDQSL RSSLLGLRQL LRELPGDEAP LDALAETVLA LLAQYGSLRI 200
    AGLYRVRHDR TPEPQPLATL GEMPVLDADD LLVRTCLERG ELVSVRQELL 250
    ERGEQRAHSA LQVCVPLVDT DGRILALLAV EQMPFFVFNE RTFSLLAILA 300
    GHIADLLQSD RRALQLADID AQRFSQYLKR SLLDARDHGL PACLYAFELT 350
    DARYGEEVQR LLEGSQRGLD VQLRLRNDEG RRVLLVLLPL TSAEGSQGYL 400
    QRLRILFAER FGQARELESL GVRIRQYELD AGNDRQALGH FLFNECGLND 450
    QQVAV 455
    Length:455
    Mass (Da):51,075
    Last modified:November 14, 2006 - v1
    Checksum:i8D024D52D32EF6C2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000438 Genomic DNA. Translation: ABJ12297.1.
    RefSeqiYP_790110.1. NC_008463.1.

    Genome annotation databases

    EnsemblBacteriaiABJ12297; ABJ12297; PA14_24510.
    GeneIDi4381085.
    KEGGipau:PA14_24510.
    PATRICi19850053. VBIPseAer79785_1987.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000438 Genomic DNA. Translation: ABJ12297.1 .
    RefSeqi YP_790110.1. NC_008463.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4DMZ X-ray 2.10 A/B 156-455 [» ]
    4DN0 X-ray 2.30 A 156-455 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 208963.PA14_24510.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ12297 ; ABJ12297 ; PA14_24510 .
    GeneIDi 4381085.
    KEGGi pau:PA14_24510.
    PATRICi 19850053. VBIPseAer79785_1987.

    Phylogenomic databases

    eggNOGi NOG12548.
    HOGENOMi HOG000247715.
    OMAi SHERLEN.
    OrthoDBi EOG6ND0FD.

    Enzyme and pathway databases

    BioCyci PAER208963:GI5K-1983-MONOMER.

    Family and domain databases

    Gene3Di 3.30.450.40. 1 hit.
    InterProi IPR003018. GAF.
    IPR029016. GAF_dom_like.
    IPR025201. KdpD_TM.
    [Graphical view ]
    Pfami PF13493. DUF4118. 1 hit.
    PF13492. GAF_3. 1 hit.
    [Graphical view ]
    SMARTi SM00065. GAF. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55781. SSF55781. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: UCBPP-PA14Imported.
    2. "Structure of the cytoplasmic region of PelD, a degenerate diguanylate cyclase receptor that regulates exopolysaccharide production in Pseudomonas aeruginosa."
      Whitney J.C., Colvin K.M., Marmont L.S., Robinson H., Parsek M.R., Howell P.L.
      J. Biol. Chem. 287:23582-23593(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 156-455 IN COMPLEX WITH CYCLICDIGUANOSINE MONOPHOSPHATE AND MAGNESIUM.

    Entry informationi

    Entry nameiQ02PM6_PSEAB
    AccessioniPrimary (citable) accession number: Q02PM6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteomeImported

    External Data

    Dasty 3