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Q02PM6

- Q02PM6_PSEAB

UniProt

Q02PM6 - Q02PM6_PSEAB

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Protein
Submitted name: Uncharacterized protein
Gene
pelD, PA14_24510
Organism
Pseudomonas aeruginosa (strain UCBPP-PA14)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi158 – 1581Magnesium 1
Metal bindingi158 – 1581Magnesium 2
Binding sitei161 – 1611Cyclic diguanosine monophosphateImported
Metal bindingi163 – 1631Magnesium 3; via carbonyl oxygen
Metal bindingi194 – 1941Magnesium 1
Metal bindingi205 – 2051Magnesium 3; via amide nitrogen
Metal bindingi215 – 2151Magnesium 3; via carbonyl oxygen
Metal bindingi362 – 3621Magnesium 4; via carbonyl oxygen
Metal bindingi365 – 3651Magnesium 5; via carbonyl oxygen
Metal bindingi367 – 3671Magnesium 2
Metal bindingi372 – 3721Magnesium 4
Metal bindingi390 – 3901Magnesium 1; via carbonyl oxygen
Metal bindingi391 – 3911Magnesium 2
Binding sitei391 – 3911Cyclic diguanosine monophosphateImported
Metal bindingi399 – 3991Magnesium 4
Metal bindingi399 – 3991Magnesium 5
Metal bindingi402 – 4021Magnesium 5
Binding sitei402 – 4021Cyclic diguanosine monophosphateImported

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi367 – 3704Cyclic diguanosine monophosphateImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. nucleotide binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

MagnesiumImported, Metal-bindingImported, Nucleotide-bindingImported

Enzyme and pathway databases

BioCyciPAER208963:GI5K-1983-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:pelDImported
Ordered Locus Names:PA14_24510Imported
OrganismiPseudomonas aeruginosa (strain UCBPP-PA14)Imported
Taxonomic identifieri208963 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000000653: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi208963.PA14_24510.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4DMZX-ray2.10A/B156-455[»]
4DN0X-ray2.30A156-455[»]

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12548.
HOGENOMiHOG000247715.
OMAiSHERLEN.
OrthoDBiEOG6ND0FD.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR025201. KdpD_TM.
[Graphical view]
PfamiPF13493. DUF4118. 1 hit.
PF13492. GAF_3. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.

Sequencei

Sequence statusi: Complete.

Q02PM6-1 [UniParc]FASTAAdd to Basket

« Hide

MSAHKDFTLA PRASGSVSWV ETLVISALAL GLGWWFSPDD PLQVNATFPW    50
VILAPLLLGM RYGFVRGLAS AALLVAALFA FRVQGVEAYA QVPAAFIVGV 100
LLCAMLVGEF RDIWERRLER LELANEYRQL RLDEFTRAHH ILRISHDRLE 150
QRVAGNDQSL RSSLLGLRQL LRELPGDEAP LDALAETVLA LLAQYGSLRI 200
AGLYRVRHDR TPEPQPLATL GEMPVLDADD LLVRTCLERG ELVSVRQELL 250
ERGEQRAHSA LQVCVPLVDT DGRILALLAV EQMPFFVFNE RTFSLLAILA 300
GHIADLLQSD RRALQLADID AQRFSQYLKR SLLDARDHGL PACLYAFELT 350
DARYGEEVQR LLEGSQRGLD VQLRLRNDEG RRVLLVLLPL TSAEGSQGYL 400
QRLRILFAER FGQARELESL GVRIRQYELD AGNDRQALGH FLFNECGLND 450
QQVAV 455
Length:455
Mass (Da):51,075
Last modified:November 14, 2006 - v1
Checksum:i8D024D52D32EF6C2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000438 Genomic DNA. Translation: ABJ12297.1.
RefSeqiYP_790110.1. NC_008463.1.

Genome annotation databases

EnsemblBacteriaiABJ12297; ABJ12297; PA14_24510.
GeneIDi4381085.
KEGGipau:PA14_24510.
PATRICi19850053. VBIPseAer79785_1987.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000438 Genomic DNA. Translation: ABJ12297.1 .
RefSeqi YP_790110.1. NC_008463.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4DMZ X-ray 2.10 A/B 156-455 [» ]
4DN0 X-ray 2.30 A 156-455 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 208963.PA14_24510.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ12297 ; ABJ12297 ; PA14_24510 .
GeneIDi 4381085.
KEGGi pau:PA14_24510.
PATRICi 19850053. VBIPseAer79785_1987.

Phylogenomic databases

eggNOGi NOG12548.
HOGENOMi HOG000247715.
OMAi SHERLEN.
OrthoDBi EOG6ND0FD.

Enzyme and pathway databases

BioCyci PAER208963:GI5K-1983-MONOMER.

Family and domain databases

Gene3Di 3.30.450.40. 1 hit.
InterProi IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR025201. KdpD_TM.
[Graphical view ]
Pfami PF13493. DUF4118. 1 hit.
PF13492. GAF_3. 1 hit.
[Graphical view ]
SMARTi SM00065. GAF. 1 hit.
[Graphical view ]
SUPFAMi SSF55781. SSF55781. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UCBPP-PA14Imported.
  2. "Structure of the cytoplasmic region of PelD, a degenerate diguanylate cyclase receptor that regulates exopolysaccharide production in Pseudomonas aeruginosa."
    Whitney J.C., Colvin K.M., Marmont L.S., Robinson H., Parsek M.R., Howell P.L.
    J. Biol. Chem. 287:23582-23593(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS) OF 156-455 IN COMPLEX WITH CYCLIC DIGUANOSINE MONOPHOSPHATE AND MAGNESIUM.

Entry informationi

Entry nameiQ02PM6_PSEAB
AccessioniPrimary (citable) accession number: Q02PM6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: September 3, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3

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