Q02D65 (Q02D65_SOLUE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 39 EMBL ABJ84618.1

Gene names

Ordered Locus Names:

Acid_3646

Organism

Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]

Taxonomic identifier

234267 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length	553 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABJ84618.1
Molecular function	Hydrolase EMBL ABJ84618.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 18	18	Potential EMBL ABJ84618.1
	Chain	19 – 553	535	Potential EMBL ABJ84618.1		PRO_5000003103

Sequences

	Sequence		Length	Mass (Da)
	Q02D65 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 93242F8F50639053	FASTA	553	61,201
	10 20 30 40 50 60 MRNFGFCMLA LAATAGAQTP VTIRVDVAAS VGAYRPMYAY FGYDEPNYTY MPNGKKLIGE 70 80 90 100 110 120 LAALSPETVQ VRVHHLLVTG DGTPALKWGS TNAYTEDAAG KPVYDWKIVD RIFDTLIEAH 130 140 150 160 170 180 ARPFVEIGFM PEALSTNPQP YVVNWPARDG GKGWSYPPKD YAKWAELVRQ WVLHSVARYG 190 200 210 220 230 240 RAEVEQWSWE LWNEPDISYW RGTPEEYNKL YDYTSDAVKR ALPTARIGGP GTTGAGAPKA 250 260 270 280 290 300 AAFLKQFLEH CARGANAATG KTGAPLDFIT YHAKGQPKVV SGHVQMGLSK EMVDVQRGIE 310 320 330 340 350 360 VINEFPQYRA LPIVLSEADP EGCAACSART NPQNLYRNGL MYPSYTAAAY SNIFKLADRY 370 380 390 400 410 420 KSNMAGMLTW AFEFEGQPYF DGFRTLATNG IDKPVLNFFR MAAMMKGDRV KVESSGGLGL 430 440 450 460 470 480 DKLLSTGVRD AADVDAMATR ADRELAVLVW NYHDDETAAT SAKVQVDVGG IAKNVGAVLV 490 500 510 520 530 540 QHYRIDDDHS NAYTLWKQMG SPQQPTEEQY AKLEASGQLQ LLTSPEWRHP KEGKLTLGFT 550 LPHHAVSLVR VTW

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000473 Genomic DNA. Translation: ABJ84618.1.
RefSeq	YP_824903.1. NC_008536.1.
3D structure databases
ProteinModelPortal	Q02D65.
ModBase	Search...
Protein-protein interaction databases
STRING	Q02D65.
Protein family/group databases
CAZy	GH39. Glycoside Hydrolase Family 39.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4428112.
GenomeReviews	Gene locus Acid_3646 in contig CP000473_GR.
KEGG	sus:Acid_3646.
NMPDR	fig|234267.9.peg.3466.
PATRIC	32009700. VBICanSol30224_3818.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3664.
HOGENOM	HBG293616.
OMA	WGSTNAY.
ProtClustDB	CLSK777942.
Family and domain databases
InterPro	IPR000514. Glyco_hydro_39. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01198.
Pfam	PF01229. Glyco_hydro_39. 1 hit. [Graphical view]
PRINTS	PR00745. GLHYDRLASE39.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q02D65_SOLUE

Accession

Primary (citable) accession number: Q02D65

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)