Q02D11 (Q02D11_SOLUE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Ordered Locus Names:

Acid_0039

Organism

Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]

Taxonomic identifier

234267 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004418 PIRNR PIRNR000185 EMBL ABJ81055.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	110	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	Q02D11 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 1D68341C8A1979D4	FASTA	420	45,433
	10 20 30 40 50 60 MLATATTPMN AYDVALENFD LAANALGLDD SIRAMIKYPE RILSVSVPVR MDTGKIVRFE 70 80 90 100 110 120 GYRVQHSTMR GPAKGGIRFH PNVTMDEVKA LATWMTWKCA VVNIPYGGGK GGVTCNPKEL 130 140 150 160 170 180 SMGELERMTR RYASSILPII GPEKDIPAPD VYTTPQIMAW IMDTYSMNKG YPVHGVVTGK 190 200 210 220 230 240 PLSIGGSLGR NEATARGVFY TTMSSCEHLG IQLAGSRVVV QGFGNAGAIA ADLFHGAGAK 250 260 270 280 290 300 VLAVSDTSGC IFNKNGLHIP AVVAYKARTG RLEGFPEATR ITPAELLALE CEILVPAALE 310 320 330 340 350 360 NAITEENAHT IHAKIISEAA NGPVTPEADR ILGSKGIFLI PDILCNAGGV TVSYFEWVQD 370 380 390 400 410 420 ENHLFWDEQD VNAKLEKIMK RSFADVLKIH LDKKVDMRLA ANMLGVSRVA EACKVRGLYP

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000473 Genomic DNA. Translation: ABJ81055.1.
RefSeq	YP_821340.1. NC_008536.1.
3D structure databases
ProteinModelPortal	Q02D11.
SMR	Q02D11. Positions 11-417.
ModBase	Search...
Protein-protein interaction databases
STRING	Q02D11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4424038.
GenomeReviews	Gene locus Acid_0039 in contig CP000473_GR.
KEGG	sus:Acid_0039.
NMPDR	fig|234267.9.peg.37.
PATRIC	32002076. VBICanSol30224_0041.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0334.
HOGENOM	HBG590661.
OMA	EGFRVQH.
PhylomeDB	Q02D11.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00262.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
PROSITE	PS00074. GLFV_DEHYDROGENASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q02D11_SOLUE

Accession

Primary (citable) accession number: Q02D11

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)