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Protein

ABC1 family protein YPL109C, mitochondrial

Gene

YPL109C

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciYEAST:G3O-34011-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
ABC1 family protein YPL109C, mitochondrial
Gene namesi
Ordered Locus Names:YPL109C
ORF Names:LPH17C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome XVI

Organism-specific databases

EuPathDBiFungiDB:YPL109C.
SGDiS000006030. YPL109C.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 1515MitochondrionSequence analysisAdd
BLAST
Chaini16 – 657642ABC1 family protein YPL109C, mitochondrialPRO_0000200738Add
BLAST

Proteomic databases

MaxQBiQ02981.

Interactioni

Protein-protein interaction databases

BioGridi36072. 82 interactions.
IntActiQ02981. 12 interactions.
MINTiMINT-4504898.

Structurei

3D structure databases

ProteinModelPortaliQ02981.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

GeneTreeiENSGT00390000001536.
HOGENOMiHOG000170353.
InParanoidiQ02981.
KOiK08869.
OMAiTLWLHLL.
OrthoDBiEOG7ZPNTM.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR004147. UbiB_dom.
[Graphical view]
PfamiPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q02981-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFLKFAYRN SWRYYSKSTR HFHKIPIRQF IIPTSIAFYL TQNSFPKQNC
60 70 80 90 100
LIYNDSLKPD PKGDTFEMGL YVSSENELQE KLKSFRSAKI TESRNKLIRY
110 120 130 140 150
LRIFWFGFND NIVEPVCTIL RFLEISAIFL PLLLLYPISW FGHKLKITDT
160 170 180 190 200
NITETRGSLI WCQLLRKALE LAGPSFIKLG QWAGSRTDIF SHALCHELGK
210 220 230 240 250
LHSNVTAHSL SFTLEKLSQA LKVDKIEDAF DEFNRTPIGV GSIAQVYVGE
260 270 280 290 300
LSQKYIDKYD NIQIGKDGNR WCAIKILHPN VRSQIRRDLK IMKFCADAIN
310 320 330 340 350
WIPTMEWLSL PSEVDQFSIL MNIQLDLRIE ALNLERFNEN FKNSIQVKFP
360 370 380 390 400
KPFLPLSNRD VMFEEHVYGL SMEKFLSTKK QINDVELCKK VSDPFVDAFL
410 420 430 440 450
QMLILDDFVH ADLHPGNVII RFVKTNKYGT NIISSELESY RITHDLRKKI
460 470 480 490 500
EEDQDQDFVG KLKSVLTNYT PQICFIDTGI ITELNEKNRI NFIALFNALA
510 520 530 540 550
RFDGYRAGEL MIERSRTPET AIDKEVFAFK VEKLVDKVKQ RTFTLGTVSI
560 570 580 590 600
GDLLDQMLSM VRSHHVRMES DFVSVVVAIL LLEGIGRQLD PNLDLFESSL
610 620 630 640 650
PILREFGFKR EAKSLLKDAS TLSMLKIWVG LEVRQLMHLS MKQIYDLVRT

DQLCPNY
Length:657
Mass (Da):76,176
Last modified:May 16, 2006 - v2
Checksum:i6814CE70DBE2B97C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43503 Genomic DNA. Translation: AAB68252.2.
BK006949 Genomic DNA. Translation: DAA11324.1.
PIRiS62012.
RefSeqiNP_015216.3. NM_001183923.1.

Genome annotation databases

EnsemblFungiiYPL109C; YPL109C; YPL109C.
GeneIDi855995.
KEGGisce:YPL109C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U43503 Genomic DNA. Translation: AAB68252.2.
BK006949 Genomic DNA. Translation: DAA11324.1.
PIRiS62012.
RefSeqiNP_015216.3. NM_001183923.1.

3D structure databases

ProteinModelPortaliQ02981.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi36072. 82 interactions.
IntActiQ02981. 12 interactions.
MINTiMINT-4504898.

Proteomic databases

MaxQBiQ02981.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYPL109C; YPL109C; YPL109C.
GeneIDi855995.
KEGGisce:YPL109C.

Organism-specific databases

EuPathDBiFungiDB:YPL109C.
SGDiS000006030. YPL109C.

Phylogenomic databases

GeneTreeiENSGT00390000001536.
HOGENOMiHOG000170353.
InParanoidiQ02981.
KOiK08869.
OMAiTLWLHLL.
OrthoDBiEOG7ZPNTM.

Enzyme and pathway databases

BioCyciYEAST:G3O-34011-MONOMER.

Miscellaneous databases

NextBioi980854.
PROiQ02981.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR004147. UbiB_dom.
[Graphical view]
PfamiPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 2 hits.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI."
    Bussey H., Storms R.K., Ahmed A., Albermann K., Allen E., Ansorge W., Araujo R., Aparicio A., Barrell B.G., Badcock K., Benes V., Botstein D., Bowman S., Brueckner M., Carpenter J., Cherry J.M., Chung E., Churcher C.M.
    , Coster F., Davis K., Davis R.W., Dietrich F.S., Delius H., DiPaolo T., Dubois E., Duesterhoeft A., Duncan M., Floeth M., Fortin N., Friesen J.D., Fritz C., Goffeau A., Hall J., Hebling U., Heumann K., Hilbert H., Hillier L.W., Hunicke-Smith S., Hyman R.W., Johnston M., Kalman S., Kleine K., Komp C., Kurdi O., Lashkari D., Lew H., Lin A., Lin D., Louis E.J., Marathe R., Messenguy F., Mewes H.-W., Mirtipati S., Moestl D., Mueller-Auer S., Namath A., Nentwich U., Oefner P., Pearson D., Petel F.X., Pohl T.M., Purnelle B., Rajandream M.A., Rechmann S., Rieger M., Riles L., Roberts D., Schaefer M., Scharfe M., Scherens B., Schramm S., Schroeder M., Sdicu A.-M., Tettelin H., Urrestarazu L.A., Ushinsky S., Vierendeels F., Vissers S., Voss H., Walsh S.V., Wambutt R., Wang Y., Wedler E., Wedler H., Winnett E., Zhong W.-W., Zollner A., Vo D.H., Hani J.
    Nature 387:103-105(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Hong E.L., Cherry J.M.
    Submitted (DEC-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: SEQUENCE REVISION.
  3. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  4. "Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii."
    Brachat S., Dietrich F.S., Voegeli S., Zhang Z., Stuart L., Lerch A., Gates K., Gaffney T.D., Philippsen P.
    Genome Biol. 4:R45.1-R45.13(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: REVISION OF GENE MODEL.
  5. "Sequencing and comparison of yeast species to identify genes and regulatory elements."
    Kellis M., Patterson N., Endrizzi M., Birren B.W., Lander E.S.
    Nature 423:241-254(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION OF FRAMESHIFTS.
  6. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
  7. Cited for: LEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS].
  8. Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
    Strain: ATCC 76625 / YPH499.
  9. "Finding functional features in Saccharomyces genomes by phylogenetic footprinting."
    Cliften P.F., Sudarsanam P., Desikan A., Fulton L., Fulton B., Majors J., Waterston R., Cohen B.A., Johnston M.
    Science 301:71-76(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION OF FRAMESHIFTS.

Entry informationi

Entry nameiYP109_YEAST
AccessioniPrimary (citable) accession number: Q02981
Secondary accession number(s): D6W3Q8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: May 16, 2006
Last modified: November 11, 2015
This is version 107 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Miscellaneous

Present with 2470 molecules/cell in log phase SD medium.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.