Q028T8 (Q028T8_SOLUE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, clan GH-D EMBL ABJ82464.1

Gene names

Ordered Locus Names:

Acid_1472

Organism

Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]

Taxonomic identifier

234267 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length	446 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABJ82464.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q028T8 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 20779F2564BEF049	FASTA	446	49,302
	10 20 30 40 50 60 MQPAFSRLAP LAAAPAIYTC YRNLMRIGFV FCTCLFALSA AEPPIVIAPT PPMGWNSWDA 70 80 90 100 110 120 YGTSVTEAEV KANADYMAAK LKSHGWQYIV VDIQWSDPLA KPHGYRPDAE LAIDEFGRLI 130 140 150 160 170 180 PAVNRFPAGF KALGDYLHAR GLKFGIHIMR GIPRRAVAAN LPIAGSKARA ADIADTKSIC 190 200 210 220 230 240 RWNTDMYGID MSKPGAQDYY DSILTLYAGW GVDFIKCDDI AQPFHGDEIA ALHKAILRTK 250 260 270 280 290 300 RPIVLSLSPG PAELSKAAFY AANANLWRIS GDFWDLWTDL RKTFDLLDKW SPYVQPGGWP 310 320 330 340 350 360 DADMLPLGRI GIRAERGNDR RTRFTPAEQR TLMTLWSIAR SPLMFGGDLP SNDAATEALL 370 380 390 400 410 420 TNDEVLAANQ KGTHSRKLSQ QGDAVIWTSD VGGRQYFAAF NLGEIPDLLI TIPGTGPLRD 430 440 VWEHRDLTNR TLRLEPHSAA LVVHVP

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000473 Genomic DNA. Translation: ABJ82464.1.
RefSeq	YP_822749.1. NC_008536.1.
3D structure databases
ProteinModelPortal	Q028T8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q028T8.
Protein family/group databases
CAZy	GH27. Glycoside Hydrolase Family 27.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4430343.
GenomeReviews	Gene locus Acid_1472 in contig CP000473_GR.
KEGG	sus:Acid_1472.
NMPDR	fig|234267.9.peg.1401.
PATRIC	32005113. VBICanSol30224_1543.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG68897.
HOGENOM	HBG424315.
OMA	DDLWDRW.
ProtClustDB	CLSK873156.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR013780. Glyco_hydro_13_b. IPR002241. Glyco_hydro_27. IPR000111. Glyco_hydro_GHD. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
Pfam	PF02065. Melibiase. 1 hit. [Graphical view]
PRINTS	PR00740. GLHYDRLASE27.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q028T8_SOLUE

Accession

Primary (citable) accession number: Q028T8

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)