Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent

Preferred order of sections

Names and origin

Protein names

Submitted name:
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent EMBL ABJ82655.1
EC=1.17.4.1 EMBL ABJ82655.1

Gene names

Ordered Locus Names:

Acid_1665

Organism

Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]

Taxonomic identifier

234267 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length	944 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABJ82655.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA replication Inferred from electronic annotation. Source: InterPro
Cellular component	ribonucleoside-diphosphate reductase complex Inferred from electronic annotation. Source: InterPro
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro cobalt ion binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro ribonucleoside-diphosphate reductase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q028A2 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 8E7C6B0D338A8F69
Show »

FASTA

944

103,579

        10         20         30         40         50         60 
MGQLSVDLSA KMESLKTRTP KKNKTGISFP RHFTAKLESG KTPYDEIQWE TRTASIGNDK 

        70         80         90        100        110        120 
GSVIFEQRDV EVPVDWSQTA TNIVASKYFY GKLGSPDRET SVQQLVQRVV DTITDWGKKD 

       130        140        150        160        170        180 
GYFKTEQDGE NFRMELAHLM LTQKACFNSP VWFNVGVKET RGYGWNYDER VGKVTKLETG 

       190        200        210        220        230        240 
VMRPQCSACF IVSVKDSLES ILDLAKTEGM LFKWGSGTGS NLSALREEDA VLSGGGRASG 

       250        260        270        280        290        300 
PLSFMKGFDA FAGVIKSGGK TRRAAKMVIL NVDHPDVDKF IWCKAKEEKK AYTLVEAGYD 

       310        320        330        340        350        360 
SSLDGEAYSS IFFQNANNSV RASDEFMDAA MRDDDWWTKG VFTGQPVKRY KAKDLMRQIA 

       370        380        390        400        410        420 
EATHQCGDPG MQFDTTVNRW HPCKNTARIN ASNPCSEYMF LDDSACNLSS LNLMKYVGPD 

       430        440        450        460        470        480 
GQFDVEAFRH AVDTMILAQE IIVDNASYPT EKIGQNSHDF RPLGLGFANL GALLMSMGVP 

       490        500        510        520        530        540 
YDSDHGRDFA GAITAVMCGQ AYLTSSRVAE AVGPFEGYAA NEDPFLEVIR MHRDSVKRIN 

       550        560        570        580        590        600 
GNHLPTALMS GAQECWDYAY ESGRRSGYRN AQVTVIAPTG TIGFMMDCDT TGIEPDLALI 

       610        620        630        640        650        660 
KYKKLVGGGV IKIVNNTVPA ALVKLGYTPE QAEKIVTHID STGTIEGAPD LKPEHLAVFD 

       670        680        690        700        710        720 
CSFRPQNGSR SIHYMGHVRM MAAVQPFISG AISKTINMPE ECTVEEIMSA YTESWKLGLK 

       730        740        750        760        770        780 
AVAIYRDNSK RVQPLSSGSG KGEKKNAGAV AIAAAAAAAP IERVVYRPVR RKLPDERRSI 

       790        800        810        820        830        840 
THKFSIGGHE GYITVGMYED GAPGEIFITM AKEGSTISGL MDAFATAVSF NLQYGVPIKF 

       850        860        870        880        890        900 
LVDKFAHVRF EPSGWTGNQQ IPYAKSIMDY IFRWLGNKFL GAEYATTEAG ETMTLRPTEA 

       910        920        930        940 
DPQQSLPFNP MTADAPLCAE CGSIMTRNGS CYKCGNCGGT SGCS

« Hide

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils."
Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M.

Kuske C.R.
Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000473 Genomic DNA. Translation: ABJ82655.1.
RefSeq	YP_822940.1. NC_008536.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q028A2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4430120.
GenomeReviews	Gene locus Acid_1665 in contig CP000473_GR.
KEGG	sus:Acid_1665.
NMPDR	fig\|234267.9.peg.1582.
PATRIC	32005527. VBICanSol30224_1743.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0209.
HOGENOM	HBG414188.
OMA	FLWRSVP.
ProtClustDB	PRK06556.
Family and domain databases
InterPro	IPR013344. RDP_Rdtase_AdoCbl-dep. IPR000788. Ribncl_red_lg_C. IPR013678. Ribonuc_red_2_N. IPR024434. TSCPD_dom. [Graphical view]
KO	K00525.
Pfam	PF08471. Ribonuc_red_2_N. 1 hit. PF02867. Ribonuc_red_lgC. 1 hit. PF12637. TSCPD. 1 hit. [Graphical view]
PRINTS	PR01183. RIBORDTASEM1.
TIGRFAMs	TIGR02504. NrdJ_Z. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q028A2_SOLUE

Accession

Primary (citable) accession number: Q028A2

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Family and domain databases

Entry information