Q027Z3 (Q027Z3_SOLUE) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 48.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Aminotransferase EMBL ABJ82664.1 EC=2.6.1.- EMBL ABJ82664.1 | ||
| Gene names |
| ||
| Organism | Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP] EMBL ABJ82664.1 | ||
| Taxonomic identifier | 234267 [NCBI] | ||
| Taxonomic lineage | Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter › ![]() |
Protein attributes
| Sequence length | 873 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | (S)-4-amino-5-oxopentanoate = 5-aminolevulinate. SAAS SAAS004639 |
| Cofactor | Pyridoxal phosphate By similarity. SAAS SAAS004639 |
| Pathway | Porphyrin metabolism; protoporphyrin-IX biosynthesis; 5-aminolevulinate from L-glutamyl-tRNA(Glu): step 2/2. SAAS SAAS004639 |
| Subcellular location | Cytoplasm By similarity SAAS SAAS004639. |
| Sequence similarities | Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Porphyrin biosynthesis SAAS SAAS004639 |
| Cellular component | Cytoplasm SAAS SAAS004639 |
| Domain | Signal EMBL ABJ82664.1 |
| Ligand | Pyridoxal phosphate SAAS SAAS004639 RuleBase RU003560 |
| Molecular function | Aminotransferase EMBL ABJ82664.1 Isomerase SAAS SAAS004639 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | protoporphyrinogen IX biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: InterPro glutamate-1-semialdehyde 2,1-aminomutase activityInferred from electronic annotation. Source: InterPro protein kinase activityInferred from electronic annotation. Source: InterPro pyridoxal phosphate bindingInferred from electronic annotation. Source: InterPro transaminase activityInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 30 | 30 | Potential EMBL ABJ82664.1 | |||||
| Chain | 31 – 873 | 843 | Potential EMBL ABJ82664.1 | PRO_5000003575 | ||||
Sequences
| ||||||||||||||||||
References
| [1] | "Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. Kuske C.R.Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ellin6076. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000473 Genomic DNA. Translation: ABJ82664.1. |
| RefSeq | YP_822949.1. NC_008536.1. |
3D structure databases | |
| ProteinModelPortal | Q027Z3. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 234267.Acid_1674. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ABJ82664; ABJ82664; Acid_1674. |
| GeneID | 4430130. |
| KEGG | sus:Acid_1674. |
| PATRIC | 32005545. VBICanSol30224_1751. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0001. |
| HOGENOM | HOG000097233. |
| KO | K00837. |
| OMA | DPDIDIW. |
| ProtClustDB | CLSK765592. |
Enzyme and pathway databases | |
| UniPathway | UPA00251; UER00317. |
Family and domain databases | |
| Gene3D | 3.40.640.10. 1 hit. 3.90.1150.10. 2 hits. |
| InterPro | IPR004639. 4pyrrol_synth_GluAld_NH2Trfase. IPR005814. Aminotrans_3. IPR011009. Kinase-like_dom. IPR000719. Prot_kinase_cat_dom. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR004147. UbiB_dom. [Graphical view] |
| PANTHER | PTHR11986. PTHR11986. 1 hit. PTHR11986:SF5. PTHR11986:SF5. 1 hit. |
| Pfam | PF03109. ABC1. 1 hit. PF00202. Aminotran_3. 1 hit. [Graphical view] |
| SUPFAM | SSF56112. Kinase_like. 1 hit. SSF53383. PyrdxlP-dep_Trfase_major. 1 hit. |
| PROSITE | PS00600. AA_TRANSFER_CLASS_3. 1 hit. PS50011. PROTEIN_KINASE_DOM. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q027Z3_SOLUE | ||||||||
| Accession | Primary (citable) accession number: Q027Z3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
