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Protein

Cytochrome c1

Gene

petC

Organism
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei58Heme (covalent)1
Binding sitei61Heme (covalent)1
Metal bindingi62Iron (heme axial ligand)1
Metal bindingi207Iron (heme axial ligand)PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Respiratory chain, Transport

Keywords - Ligandi

Heme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cytochrome c1
Gene namesi
Name:petC
Synonyms:fbcC
OrganismiRhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Taxonomic identifieri1063 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei251 – 269Helical; Note=Anchors to the membraneSequence analysisAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Add BLAST22
ChainiPRO_000000656323 – 285Cytochrome c11 PublicationAdd BLAST263

Post-translational modificationi

Binds 1 heme group per subunit.

Interactioni

Subunit structurei

The main subunits of complex b-c1 are: cytochrome b, cytochrome c1 and the Rieske protein.

Protein-protein interaction databases

DIPiDIP-61257N.
STRINGi272943.RSP_1394.

Structurei

Secondary structure

1285
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi44 – 56Combined sources13
Helixi58 – 60Combined sources3
Helixi69 – 72Combined sources4
Turni75 – 78Combined sources4
Helixi82 – 88Combined sources7
Helixi89 – 91Combined sources3
Beta strandi92 – 95Combined sources4
Turni97 – 99Combined sources3
Beta strandi101 – 104Combined sources4
Turni125 – 127Combined sources3
Beta strandi135 – 139Combined sources5
Helixi140 – 145Combined sources6
Helixi149 – 158Combined sources10
Helixi166 – 168Combined sources3
Beta strandi177 – 181Combined sources5
Beta strandi184 – 186Combined sources3
Helixi189 – 191Combined sources3
Beta strandi200 – 207Combined sources8
Beta strandi213 – 216Combined sources4
Helixi226 – 241Combined sources16
Helixi245 – 275Combined sources31

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FYNX-ray3.20B/E/H/K/N/Q23-285[»]
2QJKX-ray3.10B/E/H/K/N/Q23-278[»]
2QJPX-ray2.60B/E/H/K23-278[»]
2QJYX-ray2.40B/E/H/K/N/Q23-285[»]
5KKZX-ray2.97B/F/L/P23-285[»]
5KLIX-ray3.00B/F/L/P23-285[»]
ProteinModelPortaliQ02760.
SMRiQ02760.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ02760.

Family & Domainsi

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EIX. Bacteria.
COG2857. LUCA.

Family and domain databases

Gene3Di1.10.760.10. 1 hit.
InterProiIPR009056. Cyt_c-like_dom.
IPR002326. Cyt_c1.
[Graphical view]
PANTHERiPTHR10266. PTHR10266. 3 hits.
PfamiPF02167. Cytochrom_C1. 1 hit.
[Graphical view]
PRINTSiPR00603. CYTOCHROMEC1.
SUPFAMiSSF46626. SSF46626. 1 hit.
PROSITEiPS51007. CYTC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q02760-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRKLTLTAA TALALSGGAA MAAGGGHVED VPFSFEGPFG TFDQHQLQRG
60 70 80 90 100
LQVYTEVCAA CHGMKFVPIR SLSEPGGPEL PEDQVRAYAT QFTVTDEETG
110 120 130 140 150
EDREGKPTDH FPHSALENAA DLSLMAKARA GFHGPMGTGI SQLFNGIGGP
160 170 180 190 200
EYIYSVLTGF PEEPPKCAEG HEPDGFYYNR AFQNGSVPDT CKDANGVKTT
210 220 230 240 250
AGSWIAMPPP LMDDLVEYAD GHDASVHAMA EDVSAFLMWA AEPKLMARKQ
260 270 280
AGFTAVMFLT VLSVLLYLTN KRLWAGVKGK KKTNV
Length:285
Mass (Da):30,604
Last modified:February 1, 1994 - v1
Checksum:iA7B1E78B305D8AEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56157 Genomic DNA. Translation: CAA39625.1.
PIRiS13870.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56157 Genomic DNA. Translation: CAA39625.1.
PIRiS13870.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2FYNX-ray3.20B/E/H/K/N/Q23-285[»]
2QJKX-ray3.10B/E/H/K/N/Q23-278[»]
2QJPX-ray2.60B/E/H/K23-278[»]
2QJYX-ray2.40B/E/H/K/N/Q23-285[»]
5KKZX-ray2.97B/F/L/P23-285[»]
5KLIX-ray3.00B/F/L/P23-285[»]
ProteinModelPortaliQ02760.
SMRiQ02760.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-61257N.
STRINGi272943.RSP_1394.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105EIX. Bacteria.
COG2857. LUCA.

Miscellaneous databases

EvolutionaryTraceiQ02760.

Family and domain databases

Gene3Di1.10.760.10. 1 hit.
InterProiIPR009056. Cyt_c-like_dom.
IPR002326. Cyt_c1.
[Graphical view]
PANTHERiPTHR10266. PTHR10266. 3 hits.
PfamiPF02167. Cytochrom_C1. 1 hit.
[Graphical view]
PRINTSiPR00603. CYTOCHROMEC1.
SUPFAMiSSF46626. SSF46626. 1 hit.
PROSITEiPS51007. CYTC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiCY1_RHOSH
AccessioniPrimary (citable) accession number: Q02760
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1994
Last sequence update: February 1, 1994
Last modified: November 30, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.