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Q025X4 (Q025X4_SOLUE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Deoxyribose-phosphate aldolase HAMAP MF_00114
Short name=DERA HAMAP MF_00114
EC=4.1.2.4 HAMAP MF_00114
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolase HAMAP MF_00114
Phosphodeoxyriboaldolase HAMAP MF_00114
Gene names
Name:deoC HAMAP MF_00114
Ordered Locus Names:Acid_2205
OrganismSolibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]
Taxonomic identifier234267 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. HAMAP MF_00114 SAAS SAAS022979

Catalytic activity

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. HAMAP MF_00114 SAAS SAAS022979

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. HAMAP MF_00114 SAAS SAAS022979

Subcellular location

Cytoplasm By similarity HAMAP MF_00114 SAAS SAAS022979.

Sequence similarities

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. HAMAP MF_00114

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1821Schiff-base intermediate with acetaldehyde By similarity HAMAP MF_00114
Active site2111 By similarity HAMAP MF_00114

Sequences

Sequence LengthMass (Da)Tools
Q025X4 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: E9EBE8C7F3FF7742

FASTA24725,472
        10         20         30         40         50         60 
MQTCARNTKE IIAAGASRVS ASEKLTRIDP TIAALIDHTI LKADATREDV VKVCREARQY 

        70         80         90        100        110        120 
SFASVCVNPY WVPLVRAELA GTPVKVCTVV GFPLGATSTE AKVCETAGAI RGGAQEIDMV 

       130        140        150        160        170        180 
INVGALRSGD TDAVRSDIQA VVKVAHEAGA IVKVILETAL LNDDQKTLAS RLCKMAGADF 

       190        200        210        220        230        240 
VKTSTGFSTS GATAHDIALM RAAVGPAMGV KASGGIRTLE DVQTMTAAGA SRIGASASVK 


IVEATAA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000473 Genomic DNA. Translation: ABJ83195.1.
RefSeqYP_823480.1. NC_008536.1.

3D structure databases

ProteinModelPortalQ025X4.
SMRQ025X4. Positions 30-244.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ025X4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4429604.
GenomeReviewsGene locus Acid_2205 in contig CP000473_GR.
KEGGsus:Acid_2205.
NMPDRfig|234267.9.peg.2109.
PATRIC32006671. VBICanSol30224_2311.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0274.
HOGENOMHBG636421.
OMAIDHTNLK.
PhylomeDBQ025X4.

Family and domain databases

HAMAPMF_00114. DeoC_type1.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
IPR022979. Deoxyribose_phosphate_aldo_1.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01619.
PANTHERPTHR10889. DeoC. 1 hit.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
TIGRFAMsTIGR00126. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ025X4_SOLUE
AccessionPrimary (citable) accession number: Q025X4
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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