Q01YW2 (Q01YW2_SOLUE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative endo-1,4-beta-xylanase B EMBL ABJ85153.1

Gene names

Ordered Locus Names:

Acid_4189

Organism

Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]

Taxonomic identifier

234267 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length	287 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL ABJ85153.1
Domain	Signal EMBL ABJ85153.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 17	17	Potential EMBL ABJ85153.1
	Chain	18 – 287	270	Potential EMBL ABJ85153.1		PRO_5000004415

Sequences

	Sequence		Length	Mass (Da)
	Q01YW2 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 1B9DDA900283E008	FASTA	287	30,607
	10 20 30 40 50 60 MTALRLLLLC ASLAVAADRP EVPLWPNGAP GSQGKTAREI DEAPNKDHGY LKVTEVHNPS 70 80 90 100 110 120 LTVFLPPPDK ATGAAVIIAP GGGHRFLNFD QEGTYVAEYL NSIGVTGLVL KYRLAREPGS 130 140 150 160 170 180 TYKIEEHALA DAQRAIRMVR ARAAEGNLDP ARIGIMGFSA GGEVAALAAT RFDSGKPDAA 190 200 210 220 230 240 DPIDRVSSRP DFVALIYPGI RADQYTIPKD MPVTFMLCAD NDAGPSAALA GLYPMLKAAK 250 260 270 280 IQSELHVYAT GGHGFGVNPN TKSQAPVATT WQLRFGDWLK TIGMTKQ

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000473 Genomic DNA. Translation: ABJ85153.1.
RefSeq	YP_825438.1. NC_008536.1.
3D structure databases
ProteinModelPortal	Q01YW2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q01YW2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4427549.
GenomeReviews	Gene locus Acid_4189 in contig CP000473_GR.
KEGG	sus:Acid_4189.
PATRIC	32010832. VBICanSol30224_4381.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0657.
HOGENOM	HBG469538.
OMA	VYPGPLG.
ProtClustDB	CLSK2319346.
Family and domain databases
InterPro	IPR013094. AB_hydrolase_3. [Graphical view]
Pfam	PF07859. Abhydrolase_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q01YW2_SOLUE

Accession

Primary (citable) accession number: Q01YW2

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)