Q01X09 (Q01X09_SOLUE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 28 EMBL ABJ85806.1

Gene names

Ordered Locus Names:

Acid_4847

Organism

Solibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]

Taxonomic identifier

234267 [NCBI]

Taxonomic lineage

Bacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length	523 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABJ85806.1
Molecular function	Hydrolase EMBL ABJ85806.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL ABJ85806.1
	Chain	22 – 523	502	Potential EMBL ABJ85806.1		PRO_5000004633

Sequences

	Sequence		Length	Mass (Da)
	Q01X09 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 5E0B3AC90948F225	FASTA	523	56,190
	10 20 30 40 50 60 MNRIAIVCLS IIAAALCLNA AVVDITTFGA KGDGKTQNRD AINKAIETAA AAGGGTVEFP 70 80 90 100 110 120 AGTWLTGSLR LRSNVTLHLD RGAVIEASSD ASSYDAPEPN QWDKFQDFGH SHFHNSLIWG 130 140 150 160 170 180 EGLENIAITG GGRISGKALA RERGAAGDKA IALKLCHNVT LRDFSISTGG HFGILATGID 190 200 210 220 230 240 NLTIDNIMID TNRDGIDIDS CRNVRISNSS INAPNDDAIT LKGSHALGEP RVSENITITN 250 260 270 280 290 300 SLVSGFEIGS LLDGTYKRTV QRAPDRDGPT GRIKIGTESE GDFRNITISN VVFDTSRGLA 310 320 330 340 350 360 LESVDGAHIE DVAVSNLTMR NVSNAPIFLR LRSRMRAPEG TPIGSIKRIT ISNVIAYDAD 370 380 390 400 410 420 PRYASIIAGV PGHDVEDVKL SGIRLVYRGG LTLDDTAKQP AGLVNSFFFR ASGGVPPREP 430 440 450 460 470 480 YETPEREKEY PEPSMFGILP AYGFFIRHAA GIQLNDIDVS YIKEDRRPAF VLDSVDGVTL 490 500 510 520 ENCKARRTAT VPTLVMMNAK AVEARHCAGL PDFRTDSAAR KEM

References

[1]

"Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils." Ward N.L., Challacombe J.F., Janssen P.H., Henrissat B., Coutinho P.M., Wu M., Xie G., Haft D.H., Sait M., Badger J., Barabote R.D., Bradley B., Brettin T.S., Brinkac L.M., Bruce D., Creasy T., Daugherty S.C., Davidsen T.M. , DeBoy R.T., Detter J.C., Dodson R.J., Durkin A.S., Ganapathy A., Gwinn-Giglio M., Han C.S., Khouri H., Kiss H., Kothari S.P., Madupu R., Nelson K.E., Nelson W.C., Paulsen I., Penn K., Ren Q., Rosovitz M.J., Selengut J.D., Shrivastava S., Sullivan S.A., Tapia R., Thompson L.S., Watkins K.L., Yang Q., Yu C., Zafar N., Zhou L., Kuske C.R. Appl. Environ. Microbiol. 75:2046-2056(2009) [PubMed: 19201974] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000473 Genomic DNA. Translation: ABJ85806.1.
RefSeq	YP_826091.1. NC_008536.1.
3D structure databases
ProteinModelPortal	Q01X09.
ModBase	Search...
Protein-protein interaction databases
STRING	Q01X09.
Protein family/group databases
CAZy	GH28. Glycoside Hydrolase Family 28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4431081.
GenomeReviews	Gene locus Acid_4847 in contig CP000473_GR.
KEGG	sus:Acid_4847.
NMPDR	fig|234267.9.peg.4599.
PATRIC	32012204. VBICanSol30224_5065.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5434.
HOGENOM	HBG293348.
OMA	VNSPWDD.
ProtClustDB	CLSK807189.
Family and domain databases
InterPro	IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 2 hits.
SMART	SM00710. PbH1. 5 hits. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q01X09_SOLUE

Accession

Primary (citable) accession number: Q01X09

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)