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Q01WD3

- Q01WD3_SOLUE

UniProt

Q01WD3 - Q01WD3_SOLUE

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Acid_5077

Organism
Solibacter usitatus (strain Ellin6076)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSUSI234267:GHSK-5118-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Acid_5077Imported
    OrganismiSolibacter usitatus (strain Ellin6076)Imported
    Taxonomic identifieri234267 [NCBI]
    Taxonomic lineageiBacteriaAcidobacteriaSolibacteresSolibacteralesSolibacteraceaeCandidatus Solibacter
    ProteomesiUP000000671: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi234267.Acid_5077.

    Structurei

    3D structure databases

    ProteinModelPortaliQ01WD3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q01WD3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTMAPMEALA ALAVPEGPEW QYEPKWDGFR CIAFRRGDEV KLQSKSGQPL    50
    GRYFPDIVGA LQRVRAKEFV LDGELVIPVE GDLSFNELQL RLHPAATRVN 100
    MLAAKHPALY IVFDLLTGDL PRRPLSERRA KLEEFAARNF EGIKGLGLSP 150
    ATGSLPDARK WLRTMGGGLD GIIAKRLDAE YEPGERSGAV QKIKSLRSAD 200
    CVVGGFRYAT SGKVVGSLLL GLYDDEGLLH HVGYTSSIAG AEKAALTKKL 250
    EALREQPGFT GRAPGAPSRW STERSGEFEP LAPKLVVEVQ YDHFTGGRFR 300
    HGTKFLRWRH DKAPSQCLMS QVEHETRSPL GLLAPAAG 338
    Length:338
    Mass (Da):37,085
    Last modified:November 14, 2006 - v1
    Checksum:i47F83F88203FC697
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000473 Genomic DNA. Translation: ABJ86032.1.
    RefSeqiYP_826317.1. NC_008536.1.

    Genome annotation databases

    EnsemblBacteriaiABJ86032; ABJ86032; Acid_5077.
    GeneIDi4431949.
    KEGGisus:Acid_5077.
    PATRICi32012700. VBICanSol30224_5311.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000473 Genomic DNA. Translation: ABJ86032.1 .
    RefSeqi YP_826317.1. NC_008536.1.

    3D structure databases

    ProteinModelPortali Q01WD3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 234267.Acid_5077.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ86032 ; ABJ86032 ; Acid_5077 .
    GeneIDi 4431949.
    KEGGi sus:Acid_5077.
    PATRICi 32012700. VBICanSol30224_5311.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci SUSI234267:GHSK-5118-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ellin6076Imported.

    Entry informationi

    Entry nameiQ01WD3_SOLUE
    AccessioniPrimary (citable) accession number: Q01WD3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3