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Q01WD3

- Q01WD3_SOLUE

UniProt

Q01WD3 - Q01WD3_SOLUE

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Acid_5077

Organism
Solibacter usitatus (strain Ellin6076)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSUSI234267:GHSK-5118-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Acid_5077Imported
OrganismiSolibacter usitatus (strain Ellin6076)Imported
Taxonomic identifieri234267 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaSolibacteresSolibacteralesSolibacteraceaeCandidatus Solibacter
ProteomesiUP000000671: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi234267.Acid_5077.

Structurei

3D structure databases

ProteinModelPortaliQ01WD3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q01WD3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTMAPMEALA ALAVPEGPEW QYEPKWDGFR CIAFRRGDEV KLQSKSGQPL
60 70 80 90 100
GRYFPDIVGA LQRVRAKEFV LDGELVIPVE GDLSFNELQL RLHPAATRVN
110 120 130 140 150
MLAAKHPALY IVFDLLTGDL PRRPLSERRA KLEEFAARNF EGIKGLGLSP
160 170 180 190 200
ATGSLPDARK WLRTMGGGLD GIIAKRLDAE YEPGERSGAV QKIKSLRSAD
210 220 230 240 250
CVVGGFRYAT SGKVVGSLLL GLYDDEGLLH HVGYTSSIAG AEKAALTKKL
260 270 280 290 300
EALREQPGFT GRAPGAPSRW STERSGEFEP LAPKLVVEVQ YDHFTGGRFR
310 320 330
HGTKFLRWRH DKAPSQCLMS QVEHETRSPL GLLAPAAG
Length:338
Mass (Da):37,085
Last modified:November 14, 2006 - v1
Checksum:i47F83F88203FC697
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000473 Genomic DNA. Translation: ABJ86032.1.
RefSeqiYP_826317.1. NC_008536.1.

Genome annotation databases

EnsemblBacteriaiABJ86032; ABJ86032; Acid_5077.
GeneIDi4431949.
KEGGisus:Acid_5077.
PATRICi32012700. VBICanSol30224_5311.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000473 Genomic DNA. Translation: ABJ86032.1 .
RefSeqi YP_826317.1. NC_008536.1.

3D structure databases

ProteinModelPortali Q01WD3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 234267.Acid_5077.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ86032 ; ABJ86032 ; Acid_5077 .
GeneIDi 4431949.
KEGGi sus:Acid_5077.
PATRICi 32012700. VBICanSol30224_5311.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci SUSI234267:GHSK-5118-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ellin6076Imported.

Entry informationi

Entry nameiQ01WD3_SOLUE
AccessioniPrimary (citable) accession number: Q01WD3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: October 1, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3