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Q01RI2

- Q01RI2_SOLUE

UniProt

Q01RI2 - Q01RI2_SOLUE

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Acid_6821

Organism
Solibacter usitatus (strain Ellin6076)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (14 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSUSI234267:GHSK-6872-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Acid_6821Imported
    OrganismiSolibacter usitatus (strain Ellin6076)Imported
    Taxonomic identifieri234267 [NCBI]
    Taxonomic lineageiBacteriaAcidobacteriaSolibacteresSolibacteralesSolibacteraceaeCandidatus Solibacter
    ProteomesiUP000000671: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi234267.Acid_6821.

    Structurei

    3D structure databases

    ProteinModelPortaliQ01RI2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q01RI2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPPTSRVRF IEPMLLRRTE HLPEGDGVSY ELKLDGFRAI AYKTGGKVHL    50
    RSRNDKDFNA KYPVIVKALA HMPDETVIDG EIVALDGVGR PSFSALQNYG 100
    FSTGPLLYYA FDVMVIAGED VMALPLEDRR ELLRSRVLAK LADPIRESPE 150
    LVATLPQLIQ SVKAQGLEGP IAKRRDSRYE AGQRSGAWQK MRMNQGQDFV 200
    IAGYTPSGNG FDALIFGYYD GDRLIYVART RNGFTPASRE KLFRRFRGLE 250
    TVQCPFANLL EAKVGRWGVG LTAEKMNECK WLRPELVGQF EFLEITPDNH 300
    LRHSRFIGLR EDKKAREVER DG 322
    Length:322
    Mass (Da):36,420
    Last modified:November 14, 2006 - v1
    Checksum:i52CFCEDFC03EC4DC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000473 Genomic DNA. Translation: ABJ87738.1.
    RefSeqiYP_828023.1. NC_008536.1.

    Genome annotation databases

    EnsemblBacteriaiABJ87738; ABJ87738; Acid_6821.
    GeneIDi4425067.
    KEGGisus:Acid_6821.
    PATRICi32016366. VBICanSol30224_7132.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000473 Genomic DNA. Translation: ABJ87738.1 .
    RefSeqi YP_828023.1. NC_008536.1.

    3D structure databases

    ProteinModelPortali Q01RI2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 234267.Acid_6821.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABJ87738 ; ABJ87738 ; Acid_6821 .
    GeneIDi 4425067.
    KEGGi sus:Acid_6821.
    PATRICi 32016366. VBICanSol30224_7132.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci SUSI234267:GHSK-6872-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ellin6076Imported.

    Entry informationi

    Entry nameiQ01RI2_SOLUE
    AccessioniPrimary (citable) accession number: Q01RI2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 14, 2006
    Last sequence update: November 14, 2006
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3