SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q01RI2

- Q01RI2_SOLUE

UniProt

Q01RI2 - Q01RI2_SOLUE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: ATP dependent DNA ligase
Gene
Acid_6821
Organism
Solibacter usitatus (strain Ellin6076)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSUSI234267:GHSK-6872-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Acid_6821Imported
OrganismiSolibacter usitatus (strain Ellin6076)Imported
Taxonomic identifieri234267 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaSolibacteresSolibacteralesSolibacteraceaeCandidatus Solibacter
ProteomesiUP000000671: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi234267.Acid_6821.

Structurei

3D structure databases

ProteinModelPortaliQ01RI2.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q01RI2-1 [UniParc]FASTAAdd to Basket

« Hide

MPPPTSRVRF IEPMLLRRTE HLPEGDGVSY ELKLDGFRAI AYKTGGKVHL    50
RSRNDKDFNA KYPVIVKALA HMPDETVIDG EIVALDGVGR PSFSALQNYG 100
FSTGPLLYYA FDVMVIAGED VMALPLEDRR ELLRSRVLAK LADPIRESPE 150
LVATLPQLIQ SVKAQGLEGP IAKRRDSRYE AGQRSGAWQK MRMNQGQDFV 200
IAGYTPSGNG FDALIFGYYD GDRLIYVART RNGFTPASRE KLFRRFRGLE 250
TVQCPFANLL EAKVGRWGVG LTAEKMNECK WLRPELVGQF EFLEITPDNH 300
LRHSRFIGLR EDKKAREVER DG 322
Length:322
Mass (Da):36,420
Last modified:November 14, 2006 - v1
Checksum:i52CFCEDFC03EC4DC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000473 Genomic DNA. Translation: ABJ87738.1.
RefSeqiYP_828023.1. NC_008536.1.

Genome annotation databases

EnsemblBacteriaiABJ87738; ABJ87738; Acid_6821.
GeneIDi4425067.
KEGGisus:Acid_6821.
PATRICi32016366. VBICanSol30224_7132.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000473 Genomic DNA. Translation: ABJ87738.1 .
RefSeqi YP_828023.1. NC_008536.1.

3D structure databases

ProteinModelPortali Q01RI2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 234267.Acid_6821.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABJ87738 ; ABJ87738 ; Acid_6821 .
GeneIDi 4425067.
KEGGi sus:Acid_6821.
PATRICi 32016366. VBICanSol30224_7132.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi VEVKYGQ.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci SUSI234267:GHSK-6872-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ellin6076.

Entry informationi

Entry nameiQ01RI2_SOLUE
AccessioniPrimary (citable) accession number: Q01RI2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: November 13, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3