Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q01Q24 (Q01Q24_SOLUE) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
1,4-alpha-glucan branching enzyme GlgB HAMAP MF_00685
EC=2.4.1.18 HAMAP MF_00685
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase HAMAP MF_00685
Alpha-(1->4)-glucan branching enzyme HAMAP MF_00685
Glycogen branching enzyme HAMAP MF_00685
Gene names
Name:glgB HAMAP MF_00685
Ordered Locus Names:Acid_7335
OrganismSolibacter usitatus (strain Ellin6076) [Complete proteome] [HAMAP]
Taxonomic identifier234267 [NCBI]
Taxonomic lineageBacteria › Acidobacteria › Solibacteres › Solibacterales › Solibacteraceae › Candidatus Solibacter

Protein attributes

Sequence length724 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity. HAMAP MF_00685

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain. HAMAP MF_00685 SAAS SAAS006407

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00685 SAAS SAAS006407

Subunit structure

Monomer By similarity. HAMAP MF_00685

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. HAMAP MF_00685

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site4051Nucleophile By similarity HAMAP MF_00685
Active site4571Proton donor By similarity HAMAP MF_00685

Sequences

Sequence LengthMass (Da)Tools
Q01Q24 [UniParc].

Last modified November 14, 2006. Version 1.
Checksum: 06086CC063110422

FASTA72482,805
        10         20         30         40         50         60 
MTGEEIEAIV NGYHGDAFGI LGPHSVRKKN GNPRWEVRAF LPQADSAVVL AGTTRYDMEK 

        70         80         90        100        110        120 
RHTQGFFVAA MDGDSVPYVI RARLWDGREI EIVDPYRFGP QISDSDLYLH TEGTLNEAWR 

       130        140        150        160        170        180 
SLGAHLVTTE GASGVRFAVW APNAENVTVA GEFNDWDVRR HPMRRRNGGV WELFIPGLTQ 

       190        200        210        220        230        240 
GTAYKYNIRS RFAGYQQLKA DPYAFYCEHP PKSASVVWGL DNYQWQDQEW METRAAHDLL 

       250        260        270        280        290        300 
KSPMAVYEVH LGSWMRGPMG QVLTYRDLAV KLVEYVKQMG YTHVELLPPM EHPFSGSWGY 

       310        320        330        340        350        360 
QIIGYFAPTS RFGTPDDFKF FIDAFHRAGI GVIVDWVPAH FPKDAHGLVF FDGTALYEHA 

       370        380        390        400        410        420 
DPRKGEQQDW GTLVFNYGRN EVRTFLISNA LFWLKEMHID GLRVDAVASM LYLDYSRKAG 

       430        440        450        460        470        480 
EWIPNQYGGN ENLEAIDFLR QFNVVAHSVP GAFTVAEEST AFAGVSKPVY LNGLGFTMKW 

       490        500        510        520        530        540 
NMGWMHDMLD YFSNDPIYRK YHHNSITFSL LYAFTENFVL PVSHDEVVHG KGSLLNKMPG 

       550        560        570        580        590        600 
DEWRQFANAR AFLAYMWVHP GKKLLFMGQE IGQREEWNHD QGIRWELLQF DLHRQLQSLM 

       610        620        630        640        650        660 
RELNRVYKAN PALYEIDFHY TGFEWVDFHD GANSIIAFLR RAEDPDDFIL VCCNFTPVPR 

       670        680        690        700        710        720 
QGYEFGVPEE GFYQEILNTD SEYFGGTNMG NGGCLSSRPI AKHNRSHSIA VTLPPLAVVA 


FKKC

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000473 Genomic DNA. Translation: ABJ88246.1.
RefSeqYP_828531.1. NC_008536.1.

3D structure databases

ProteinModelPortalQ01Q24.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ01Q24.

Protein family/group databases

CAZyCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4424671.
GenomeReviewsGene locus Acid_7335 in contig CP000473_GR.
KEGGsus:Acid_7335.
NMPDRfig|234267.9.peg.6958.
PATRIC32017415. VBICanSol30224_7656.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0296.
HOGENOMHBG287139.
OMADGTCLYE.
PhylomeDBQ01Q24.
ProtClustDBPRK05402.

Family and domain databases

HAMAPMF_00685. GlgB.
[Tree]
InterProIPR006407. 1-4-A-glucan_branch_enz.
IPR006048. A-amylase_b_C.
IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KOK00700.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PTHR10357:SF13. PTHR10357:SF13. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
TIGRFAMsTIGR01515. Branching_enzym. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ01Q24_SOLUE
AccessionPrimary (citable) accession number: Q01Q24
Entry history
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: December 14, 2011
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info