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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Acid_7844

Organism
Solibacter usitatus (strain Ellin6076)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSUSI234267:GHSK-7894-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Acid_7844Imported
OrganismiSolibacter usitatus (strain Ellin6076)Imported
Taxonomic identifieri234267 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaSolibacteresSolibacteralesSolibacteraceaeCandidatus Solibacter
ProteomesiUP000000671 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi234267.Acid_7844.

Structurei

3D structure databases

ProteinModelPortaliQ01NN0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiQPRIANS.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. LigD_ligase_dom.
IPR014145. LigD_pol_dom.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q01NN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAEMPASIE PMKATIAERV PRGDEWLFEI KWDGVRAVAF LDNEEVRLQA
60 70 80 90 100
RSGLRCERQY PELAVLPHHV AAARAILDGE IAVLDAKGVS QFHLIQPRIA
110 120 130 140 150
NSDPNTIAHL VRSTPVVYFA FDLLYLDGYD LRNVDLAKRR ELLERVLTPG
160 170 180 190 200
AQVRVSDVFP GAGEALLEAA RENGLEGIIA KHPRSCYESR RSREWLKIKI
210 220 230 240 250
VTEQEFVIGG FTEPQGDRQY FGALVLGVQK AGALRWVGNV GTGFDQKLLA
260 270 280 290 300
SLYARLEPLI TTKCPFVERP KPDRGMTWVR PELVCQVKYG NWTPDDRLRA
310 320 330 340 350
PVFIGLRNDK PVVEVEKETT GELLPKSKEA TLPIDGRTLK FTNLSKLYYP
360 370 380 390 400
DDGVSKRDVI NYYDSVADLI LPHLRDRPLS LKRYPNGIKE DFFFQKNTPE
410 420 430 440 450
TYPAWMRTEL IDSDHAGAIN YVFADDRASL LYLVNLGCID QNPWISRSGS
460 470 480 490 500
LDNPDFVLID LDPQECAYDL IVEAAVMVKE ILDRIGLKGY PKTTGGDGMH
510 520 530 540 550
VYIPVEAVYS YEETRIFAEL IARLVTQRKP QMYTTPRSVS KRQKNRVYFD
560 570 580 590 600
YLQNGKSKTI AAPYVLRAYP GAPVATPLEW SEVKPGLDPK QFHIGNARER
610 620 630
FRKKGDLFRG VLDAPQNLYD ALGKLEKLFR
Length:630
Mass (Da):71,353
Last modified:November 14, 2006 - v1
Checksum:i33D46597A808F331
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000473 Genomic DNA. Translation: ABJ88740.1.
RefSeqiWP_011689451.1. NC_008536.1.
YP_829025.1. NC_008536.1.

Genome annotation databases

EnsemblBacteriaiABJ88740; ABJ88740; Acid_7844.
KEGGisus:Acid_7844.
PATRICi32018468. VBICanSol30224_8181.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000473 Genomic DNA. Translation: ABJ88740.1.
RefSeqiWP_011689451.1. NC_008536.1.
YP_829025.1. NC_008536.1.

3D structure databases

ProteinModelPortaliQ01NN0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi234267.Acid_7844.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABJ88740; ABJ88740; Acid_7844.
KEGGisus:Acid_7844.
PATRICi32018468. VBICanSol30224_8181.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiQPRIANS.
OrthoDBiEOG661H49.

Enzyme and pathway databases

BioCyciSUSI234267:GHSK-7894-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. LigD_ligase_dom.
IPR014145. LigD_pol_dom.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ellin6076Imported.

Entry informationi

Entry nameiQ01NN0_SOLUE
AccessioniPrimary (citable) accession number: Q01NN0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 14, 2006
Last sequence update: November 14, 2006
Last modified: May 27, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.